Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_J70590
BBa_J70590 Version 1 (Component)
Protein fusion test part S04432(J70569:J70575):J70554

BBa_J70552
BBa_J70552 Version 1 (Component)
J70551.J70549 (or J70548.J70550.J70549) composite part

BBa_J70556
BBa_J70556 Version 1 (Component)
BsaXI test circuit: J70555.J70554 or J70554.J70550.J70554

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_S04432
BBa_S04432 Version 1 (Component)
J70569:J70575

BBa_S04443
BBa_S04443 Version 1 (Component)
J70575:J70554

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

BBa_J70555
BBa_J70555 Version 1 (Component)
J70553.J70550 composite part

BBa_J70562
BBa_J70562 Version 1 (Component)
C-Terminal fusion test: J70561:J70550

BBa_J70551
BBa_J70551 Version 1 (Component)
J70548.J70550 composiste part

BBa_J70589
BBa_J70589 Version 1 (Component)
N-terminal protein tag addition test part J70576:S04431(J70575:E0040)

BBa_J70572
BBa_J70572 Version 1 (Component)
J70570(AK) +J70568(AT) into (AC)

BBa_J70559
BBa_J70559 Version 1 (Component)
N-terminal fusion test: R0010:J70558 or R0010:J70550:E0040

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

BBa_J70660
BBa_J70660 Version 1 (Component)
J70577 cut with BsaXI and with 6his inserts (J70564-fi) added

BBa_J70596
BBa_J70596 Version 1 (Component)
J70577 cut with BsaXI and with 6his inserts (J70564-fi) added

BBa_J70566
BBa_J70566 Version 1 (Component)
Test part for J70550

BBa_J70597
BBa_J70597 Version 1 (Component)
J70577 cut with BsaXI and with 6his inserts (J70564-fi) added

BBa_J70605
BBa_J70605 Version 1 (Component)
J70590 cut with BsaXI and with GSGSGS inserts (J70556-fi,ri) added

BBa_J70662
BBa_J70662 Version 1 (Component)
Short fusion insert test, designed from J70590 to recreate J04430

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

BBa_J70604
BBa_J70604 Version 1 (Component)
J70589 cut with BsaXI and with rbs, 6his inserts (J70559-f1i,f2i,r2i,r2i) added

BBa_S04431
BBa_S04431 Version 1 (Component)
J70575:E0040

BBa_J70606
BBa_J70606 Version 1 (Component)
J70590 cut with BsaXI and with dead fusion inserts (J70556d-fi,ri) added

BBa_J70558
BBa_J70558 Version 1 (Component)
J70550:E0040

BBa_J70524
BBa_J70524 Version 1 (Component)
hard codes sequence of J70514 into a part