ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

BBa_K2066019
BBa_K2066019 Version 1 (Component)
UNS 3 Sequence, from Torella et al., 2013

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1106006
BBa_K1106006 Version 1 (Component)
Pulse generator part 3

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

BBa_K1106007
BBa_K1106007 Version 1 (Component)
pulse generator part 2

BBa_K1106008
BBa_K1106008 Version 1 (Component)
Pulse generator part 1

BBa_K145007
BBa_K145007 Version 1 (Component)
Pulse Generator

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

BBa_K145107
BBa_K145107 Version 1 (Component)
Lactonase pulse generator

BBa_K145117
BBa_K145117 Version 1 (Component)
Lactonase pulse generator

BBa_K209400
BBa_K209400 Version 1 (Component)
AarI B-C part, hM4D

BBa_J110001
BBa_J110001 Version 1 (Component)
pulse generator/feedback controller

BBa_K396007
BBa_K396007 Version 1 (Component)
T7 RNA Polymerase pulse generator

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

BBa_I1466
BBa_I1466 Version 1 (Component)
RhlR protein generator (LVA-)

BBa_K081012
BBa_K081012 Version 1 (Component)
GFP protein generator - PoPS->GFP

BBa_J11002
BBa_J11002 Version 1 (Component)
improved pulse generator/PI controller

BBa_K145201
BBa_K145201 Version 1 (Component)
INPUT TetR generator

HP3 3
BBa_B0101 Version 1 (Component)
HP3 3

BBa_M36709
BBa_M36709 Version 1 (Component)
Gemini Protein Generator

BBa_J37019
BBa_J37019 Version 1 (Component)
AHL induced LuxR generator

BBa_S03119
BBa_S03119 Version 1 (Component)
--Specify Parts List--

BBa_K309012
BBa_K309012 Version 1 (Component)
Unc-54 3' UTR (for use in C. elegans chassis)

BBa_K209415
BBa_K209415 Version 1 (Component)
AarI B-C part, hM2D

BBa_K396006
BBa_K396006 Version 1 (Component)
GFP pulse generator with pLux/cI434 hybrid promoter

BBa_K737017
BBa_K737017 Version 1 (Component)
This part conteins gvpC-20psi protein

BBa_K081016
BBa_K081016 Version 1 (Component)
lasI protein generator - PoPS->lasI

BBa_J70042
BBa_J70042 Version 1 (Component)
6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)

BBa_K081009
BBa_K081009 Version 1 (Component)
lasI protein generator (TERM-)

BBa_K516030
BBa_K516030 Version 1 (Component)
mRFP protein generator TERM+ RBS+(B0030)

BBa_K081008
BBa_K081008 Version 1 (Component)
luxI protein generator (TERM-)

BBa_J58120
BBa_J58120 Version 1 (Component)
OmpR-P detector with a RFP pulse generator at intermediate concentrations

BBa_K165011
BBa_K165011 Version 1 (Component)
Zif268-HIV binding sites (3)