iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K1188002BBa_K1188002 Version 1 (Component)RTX - Calcium Binding Protein
BBa_K1820012BBa_K1820012 Version 1 (Component)RBS + mCherry(Lr) + terminator
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K2185002BBa_K2185002 Version 1 (Component)Penicillium alpha amylase coding sequence
BBa_K1820023BBa_K1820023 Version 1 (Component)FspI + terminator
BBa_K2180002BBa_K2180002 Version 1 (Component)Fructose Operator - FruR Binding Site
BBa_K2184002BBa_K2184002 Version 1 (Component)Guid RNA for coffee bitterness flavor
BBa_K1820022BBa_K1820022 Version 1 (Component)FspI restriction enzyme
BBa_K2182001BBa_K2182001 Version 1 (Component)His Tagged NOX
BBa_K2182004BBa_K2182004 Version 1 (Component)RBS for BBa_K2182003
BBa_K1228002BBa_K1228002 Version 1 (Component)Rabies virus strain ERA glycoprotein coding sequence
FurBO_11498 Version 1 (Component) BBa_K182002BBa_K182002 Version 1 (Component)Intermediate Part consisting of a cI regulated promoter and TetR (RBS+, Term-).
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
BBa_K2142002BBa_K2142002 Version 1 (Component)Promoter combination of lac-tac
BBa_K2182002BBa_K2182002 Version 1 (Component)Expression for Proteorhodopsin and BLH
BBa_K1682002BBa_K1682002 Version 1 (Component)<i>P<sub>kdpF</sub>[-15, T>A]</i>
BBa_K2082002BBa_K2082002 Version 1 (Component)Split CFP Bimolecular fluorescence complementation (BiFC) with anti-GFP-Nanobody
BBa_K2182000BBa_K2182000 Version 1 (Component)S. sanguinis H2O forming NADPH Dehydrogenase
BBa_K2186002BBa_K2186002 Version 1 (Component)gRNA targeting AcrB in E. Coli BL21(DE3)
BBa_K2182005BBa_K2182005 Version 1 (Component)RBS for BBa_K2182002
BBa_K2172002BBa_K2172002 Version 1 (Component)Tac Promoter-RBS-GST-Thrombin Protease-TEV-GFP-
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K1152002BBa_K1152002 Version 1 (Component)TycC5 Module from Tyrocidine cluster
p2001BBa_K1820002 Version 1 (Component)P335-Φ31phage genetic switch-divergent promoter
BBa_K2182003BBa_K2182003 Version 1 (Component)Translational Unit for His-tagged NOX
BBa_K212002BBa_K212002 Version 1 (Component)OmpC-RFP (promoter-reporter transduction readout)
BBa_K218002BBa_K218002 Version 1 (Component)LuxOU under constitutive expression of TetR repressible promoter
BBa_K1128002BBa_K1128002 Version 1 (Component)M.SssI with a linker - ready for fusing
BBa_K1082002BBa_K1082002 Version 1 (Component)Pm/XylS promoter system
BBa_K1182007BBa_K1182007 Version 1 (Component)Antigen85 Biosensor - α fragment
BBa_K1180002BBa_K1180002 Version 1 (Component)fusion protein of lamp 2b and RVG for brain targeting of the exosome