Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
//rnaprnap Version 1 (Collection) //dnadna Version 1 (Collection) BBa_K115003BBa_K115003 Version 1 (Component)RNA thermometer (PrfA)
BBa_K346000BBa_K346000 Version 1 (Component)RBS(B0032)+T3 DNA-directed RNA polymerase
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K115017BBa_K115017 Version 1 (Component)RNA thermometer (ROSE 32??C)
T7polBBa_K145001 Version 1 (Component)T7 RNA polymerase
BBa_K1450012BBa_K1450012 Version 1 (Component)T7 RNA Polymerase and DNA Polymerase
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_R0182BBa_R0182 Version 1 (Component)T7 RNAP promoter
BBa_K1510101BBa_K1510101 Version 1 (Component)sRNA targets histidine kinase 11 mRNA in S.mutans
BBa_K1510102BBa_K1510102 Version 1 (Component)sRNA targets G protein mRNA in S.mutans
BBa_K1510007BBa_K1510007 Version 1 (Component)sRNA targets G protein mRNA in S.mutans
BBa_K864440BBa_K864440 Version 1 (Component)Small RNA spot42
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
ChiXmBBa_K564019 Version 1 (Component)Mutated small RNA involved in RNA regulation of ChiP.
BBa_K165006BBa_K165006 Version 1 (Component)Zif268-HIV DNA-binding domain
BBa_K1487003BBa_K1487003 Version 1 (Component)Guide RNA (gRNA) target for acfD
BBa_K1487000BBa_K1487000 Version 1 (Component)Guide RNA (gRNA) target for acfA
BBa_K1487002BBa_K1487002 Version 1 (Component)Guide RNA (gRNA) target for acfC
BBa_K1487020BBa_K1487020 Version 1 (Component)Guide RNA (gRNA) target for toxT
BBa_K1487009BBa_K1487009 Version 1 (Component)Guide RNA (gRNA) target for tcpD