SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J16103BBa_J16103 Version 1 (Component)SPOM - Super Powers Output Module
BBa_K2116017BBa_K2116017 Version 1 (Component)super folder green fluorescent protein
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K864203BBa_K864203 Version 1 (Component)LexA3 super-repressor
BBa_K864202BBa_K864202 Version 1 (Component)MarR(G95S) super-repressor
BBa_J03211BBa_J03211 Version 1 (Component)MBP Output Module
BBa_M1601BBa_M1601 Version 1 (Component)CXCR3 Output Module
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_J24005BBa_J24005 Version 1 (Component)Dance Output Module: 'PoPS' -> Dance
BBa_J24004BBa_J24004 Version 1 (Component)WoM (Wiggle output module, PoPS->WigL+PoPS)
C2HP/RGEBBa_K1442107 Version 1 (Component)C2HP Testing Module (reverse GFP)
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
Fast SuperBBa_K1506002 Version 1 (Component)Optimized Superfolder GFP - only fast codons
BBa_K592020BBa_K592020 Version 1 (Component)PFixK2-lambda C1-B0034-amilCP blue light sensor output
BBa_J16100BBa_J16100 Version 1 (Component)SupR Gene
spoVMBO_31458 Version 1 (Component) SpoVMBO_10021 Version 1 (Component) TamuraBBa_K1763444 Version 1 (Component)Bombyx mori silk co-spinning module
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)
BBa_I6413BBa_I6413 Version 1 (Component)Promoter high output protein generator
mCherryBBa_K678020 Version 1 (Component)mCherry-module
BBa_K1491021BBa_K1491021 Version 1 (Component)Constitutive Codon Optimized Super Nova
spoVMBO_3151 Version 1 (Component) spo0MBO_3313 Version 1 (Component) BBa_K592029BBa_K592029 Version 1 (Component)PcpcG2-B0034-BFP green light sensor output
BBa_K1371039BBa_K1371039 Version 1 (Component)loading module+module(1+2)
BBa_K1484315BBa_K1484315 Version 1 (Component)Output Expression Cassette (HAP1, Modular Cloning Level 1 + PlantSyntax compatible)
mRFP1BBa_K678030 Version 1 (Component)mRFP1-module
eYFPBBa_K678009 Version 1 (Component)eYFP-module
BBa_K1159301BBa_K1159301 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2) in RFC[25]
spoBBa_S03348 Version 1 (Component)spo0A
BBa_I4204BBa_I4204 Version 1 (Component)Prakash *: Syncronator Cell-Signalling Module
eGFP-PTSBBa_K678017 Version 1 (Component)eGFP-PTS-module
BBa_K564021BBa_K564021 Version 1 (Component)aTC regulated promoter module: aTC--PoPS
fliC_MCSBBa_K1617000 Version 1 (Component)Modular Flagellin - FliC_MCS
eCFPBBa_K678015 Version 1 (Component)eCFP-module
BBa_K1371004BBa_K1371004 Version 1 (Component)AT-ACP-L1(loading module)
BBa_I5612BBa_I5612 Version 1 (Component)Brickalator 2.0 (Output-)
BBa_K510019BBa_K510019 Version 1 (Component)Improved Flip Flop (Module I)
BBa_K528014BBa_K528014 Version 1 (Component)RBS measurement device J23100 B0034 Super Folder GFP
BBa_K528012BBa_K528012 Version 1 (Component)RBS measurement device J23100 B0032 Super Folder GFP
BBa_K528013BBa_K528013 Version 1 (Component)RBS measurement device J23100 B0033 Super Folder GFP
BBa_K528011BBa_K528011 Version 1 (Component)RBS measurement device J23100 B0031 Super Folder GFP