Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K942007BBa_K942007 Version 1 (Component)SS+Api m 6+His
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
tetRBBa_Q04400 Version 1 (Component)QPI (B0034.C0040.B0015.R0040)
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_Q04510BBa_Q04510 Version 1 (Component)QPI (B0034.C0051.B0015.R0051)
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K942009BBa_K942009 Version 1 (Component)SS+ Zea m 14+His
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
"M"BBa_K1080004 Version 1 (Component)ChlM
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_Q01121BBa_Q01121 Version 1 (Component)QPI (B0031.C0012.B0015.R0011)
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
MorABBa_K1615000 Version 1 (Component)Morphine-6-dehydrogenase RFC25
M-BBBa_K774001 Version 1 (Component)Mammalian-Bacterial Promoter: E9-ns2 CArG promoter sequence + BHN + BBaK216005
BBa_J70048BBa_J70048 Version 1 (Component)6his part for use with BioScaffold parts ATG-GGATCC (glycine serine)-6 His-TAA
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
B-MBBa_K774000 Version 1 (Component)Bacterial-Mammalian Promoter: BBaK216005 + BHN + CArG promoter sequence E9-ns2
BBa_K2012028BBa_K2012028 Version 1 (Component)PleD-His(6)Tag
BBa_I746907BBa_I746907 Version 1 (Component)T7 promoter driving 6-his tagged P7 GFP
BBa_I746918BBa_I746918 Version 1 (Component)mut3b GFP with 6-his tag
slr2016 SSBBa_K125310 Version 1 (Component)slr2016 signal sequence from cyanobacterium Synechocystis; secretes protein
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
BBa_K1582035BBa_K1582035 Version 1 (Component)Linker+inJanus-m
BBa_I746902BBa_I746902 Version 1 (Component)pbad promoter driving 6-his tagged mut3 GFP
BBa_I746920BBa_I746920 Version 1 (Component)P7 GFP with 6-his tag
BBa_J202005BBa_J202005 Version 1 (Component)PBAD Mutant#6
BBa_K1582036BBa_K1582036 Version 1 (Component)Linker+sJanus-m
SSBBa_K265002 Version 1 (Component)Proteolytic Cleavage Sequence
d6desBBa_K925003 Version 1 (Component)Delta-6 desaturase
BBa_K1808004BBa_K1808004 Version 1 (Component)ALDH1 from Artemisia annua, 6 His tagged
BBa_I746919BBa_I746919 Version 1 (Component)superfolder GFP with 6-his tag
BBa_K942018BBa_K942018 Version 1 (Component)Shuttle Sequence (SS+B.P.S.)