iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_K899001BBa_K899001 Version 1 (Component)Fructan fructan fructosyltransferase (FFT)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
BBa_K899000BBa_K899000 Version 1 (Component)Sucrose sucrose fructosyltransferase (SST)
BBa_K899011BBa_K899011 Version 1 (Component)FFT (BBa_K899001) with double RBS (BBa_K899009)
BBa_K199001BBa_K199001 Version 1 (Component)CUAGU tRNA Suppressor (Produces Serine)
BBa_K899010BBa_K899010 Version 1 (Component)Doubble ribosomal binding site (SST) (shine-dalgarno and kozak sequence)
BBa_K899012BBa_K899012 Version 1 (Component)SST (BBa_K899001) with double RBS (BBa_K899010)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
mtGFPBBa_K809001 Version 1 (Component)Mitochondrial GFP
BBa_K199016BBa_K199016 Version 1 (Component)CUAGC tRNA Suppressor (Produces Serine)
BBa_K1899001BBa_K1899001 Version 1 (Component)Blue Fluorescent Protein mTagBFP generator (Medium RBS)
lsrRBBa_K091001 Version 1 (Component)LsrR gene
BBa_K199014BBa_K199014 Version 1 (Component)AGGAC tRNA Suppressor (Produces Serine)
BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed
BBa_K199000BBa_K199000 Version 1 (Component)CCCUC tRNA Suppressor (Produces Serine)
BBa_K819010BBa_K819010 Version 1 (Component)Medium cheZ generator
BBa_K1399001BBa_K1399001 Version 1 (Component)RFP from Discosoma striata (coral) with LVA-ssrA degradation tag
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K199018BBa_K199018 Version 1 (Component)pOmpC (with intrinsic RBS)
BBa_K899009BBa_K899009 Version 1 (Component)Doubble ribosomal binding site (FFT) (shine-dalgarno and kozak sequence)
pBar1BBa_K1829001 Version 1 (Component)pBar1: Mating factor alpha responsive promoter
BBa_K199011BBa_K199011 Version 1 (Component)RFP with CCCUC Addition
BBa_K1799010BBa_K1799010 Version 1 (Component)LsrB (modularization optimized)
T7Gene6BBa_K093001 Version 1 (Component)T7 Gene 6 exonuclease
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K849001BBa_K849001 Version 1 (Component)Farnesyl-Pyrophosphate-Synthase from Yeast
BBa_K809010BBa_K809010 Version 1 (Component)Upstream recombination site of cox3
BBa_K899008BBa_K899008 Version 1 (Component)antitoxin ccdA
BBa_K179001BBa_K179001 Version 1 (Component)leucine dehydrogenase
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K899004BBa_K899004 Version 1 (Component)Reporter system for SST and FFT (BBa_K899000 and BBa_K899001)
BBa_K799010BBa_K799010 Version 1 (Component)Ethanol/Stress Inducible YEL039C Promoter
BBa_K896010BBa_K896010 Version 1 (Component)smtA ( Metallothionein, Cd2+ binding protein)