Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K106011BBa_K106011 Version 1 (Component)Sas2 histone acetyltransferase, Aar1 AB part
BBa_K106012BBa_K106012 Version 1 (Component)Sas2 histone acetyltransferase, Aar1 BD part
BBa_K209018BBa_K209018 Version 1 (Component)Aar1 A-B part, cAR1 (Dictyostelium discoideum)
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K106013BBa_K106013 Version 1 (Component)Esa1 histone acetyltransferase, Aar1 BD part
BBa_K106002BBa_K106002 Version 1 (Component)Sir2, Aar1 AB part
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K209019BBa_K209019 Version 1 (Component)Aar1 A-B part, PLCdelta-PH (Dictyostelium discoideum)
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_K106004BBa_K106004 Version 1 (Component)mCherry, Aar1 AB part
BBa_K106009BBa_K106009 Version 1 (Component)Pif3, Aar1 AB part
BBa_K106010BBa_K106010 Version 1 (Component)PhyB, Aar1 AB part
BBa_K106007BBa_K106007 Version 1 (Component)LexA (1-87) DBD, Aar1 AB part
BBa_K106671BBa_K106671 Version 1 (Component)GFP, Aar1 AD part
BBa_K209022BBa_K209022 Version 1 (Component)Aar1 A-B part, PTEN (full length) (Dictyostelium discoideum)
BBa_K209020BBa_K209020 Version 1 (Component)Aar1 A-B part, RBD (Dictyostelium discoideum)
BBa_K209006BBa_K209006 Version 1 (Component)Aar1 C-D part, Dd5P2 (aa435-787)
BBa_K106664BBa_K106664 Version 1 (Component)Gli1 AB AarI part
BBa_K209021BBa_K209021 Version 1 (Component)Aar1 A-B part, PI3K (aa170-290) (Dictyostelium discoideum)
M256I CysEBBa_K731010 Version 1 (Component)M256I CysE (Serine Acetyltransferase)
BBa_K209013BBa_K209013 Version 1 (Component)Aar1 C-D part, NFA (aa1-359) (Dictyostelium discoideum)
CmRBBa_J31005 Version 1 (Component)chloramphenicol acetyltransferase (forwards, CmF) [cf. BBa_J31004]
BBa_K106668BBa_K106668 Version 1 (Component)Tet Repressor, AarI AB part
BBa_K106666BBa_K106666 Version 1 (Component)Lac Repressor, AarI AB part
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K209015BBa_K209015 Version 1 (Component)Aar1 C-D part, Inp54p
BBa_K209071BBa_K209071 Version 1 (Component)Aar1 A-B part, PH-Akt
ATF1BBa_J45014 Version 1 (Component)alcohol acetyltransferase I; converts isoamyl alcohol to isoamyl acetate (banana odor)
BBa_K209010BBa_K209010 Version 1 (Component)Aar1 C-D part, RasC da (no CAAX) (Dictyostelium discoideum)
BBa_K209012BBa_K209012 Version 1 (Component)Aar1 C-D part, RasG dn (no CAAX) (Dictyostelium discoideum)
BBa_K209011BBa_K209011 Version 1 (Component)Aar1 C-D part, RasG da (no CAAX) (Dictyostelium discoideum)
WT CysEBBa_K731000 Version 1 (Component)CysE (Serine Acetyltransferase)
BBa_K209404BBa_K209404 Version 1 (Component)AarI C-D part, ActA (30-612)
BBa_K209410BBa_K209410 Version 1 (Component)AarI C-D part, ActA (255-392)
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_K106003BBa_K106003 Version 1 (Component)Sir2, Aar1 BD part
BBa_K209009BBa_K209009 Version 1 (Component)Aar1 C-D part, SHIP1 (aa364-826) (Dictyostelium discoideum)
BBa_K209023BBa_K209023 Version 1 (Component)Aar1 C-D part, FKBP
BBa_K209408BBa_K209408 Version 1 (Component)AarI C-D part, Intersectin (ITSN)
BBa_K209411BBa_K209411 Version 1 (Component)AarI C-D part, Lamellipodin (LPD) (775-1250)