Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K301010BBa_K301010 Version 1 (Component)Self-induction Genetic Circuit
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
BBa_K301008BBa_K301008 Version 1 (Component)Self-induction Genetic Circuit with an Inducible Promoter
BBa_K301007BBa_K301007 Version 1 (Component)Low Oxygen Level Self-induction Genetic Circuit. mNarK promoter
BBa_K301006BBa_K301006 Version 1 (Component)Low Oxygen Level Self-induction Genetic Circuit. NarK promoter
mRFP sel.BBa_K1362422 Version 1 (Component)mRFP selection marker with outward BsaI restriction sites
BBa_K300010BBa_K300010 Version 1 (Component)PoPS-based self-inducible device
BBa_K576003BBa_K576003 Version 1 (Component)Left Part of Self-Excising Ribozyme
BBa_K576004BBa_K576004 Version 1 (Component)Right Part of Self-Excising Ribozyme
SepFBO_9330 Version 1 (Component) BBa_J22151BBa_J22151 Version 1 (Component)UV-switch circuit
BBa_K1319004BBa_K1319004 Version 1 (Component)TEV protease with anti-self cleavage mutation S219V, codon optimized for E. coli
BBa_K362006BBa_K362006 Version 1 (Component)yaiA shows OxyR-dependent induction of expression by hydrogen peroxide.
BBa_J37005BBa_J37005 Version 1 (Component)self-destruct DNA
AraC_14_3CBBa_K627011 Version 1 (Component)Fusion part of pBAD arabinose-inducible induction system and the HRV 14_3C protease
BBa_M36952BBa_M36952 Version 1 (Component)GSG + T2A Self-Cleaving Sequence
BBa_K1253112BBa_K1253112 Version 1 (Component)LacI self-regulatory oscillator
BBa_K2136017BBa_K2136017 Version 1 (Component)F2A self-cleaving peptide sequence
BBa_S03374BBa_S03374 Version 1 (Component)LacI controlled MotB (induction test)
BBa_K300016BBa_K300016 Version 1 (Component)Self-inducible device with J23116
BBa_K300015BBa_K300015 Version 1 (Component)Self-inducible device with J23114
BBa_K300013BBa_K300013 Version 1 (Component)Self-inducible device with J23106
BBa_K300017BBa_K300017 Version 1 (Component)Self-inducible device with J23118
BBa_K300011BBa_K300011 Version 1 (Component)Self-inducible device with J23101
BBa_K300014BBa_K300014 Version 1 (Component)Self-inducible device with J23110
BBa_K300012BBa_K300012 Version 1 (Component)Self-inducible device with J23105
BBa_K774201BBa_K774201 Version 1 (Component)Multiplicative Circuit Modulator
BBa_K748003BBa_K748003 Version 1 (Component)yddV is a Diguanylate Cyclase-Genomic.
BBa_K1510214BBa_K1510214 Version 1 (Component)Dispersin generator circuit
BBa_K1673310BBa_K1673310 Version 1 (Component)Optimized VERT Circuit
BBa_K127999BBa_K127999 Version 1 (Component)Saito Cell for self reproduction
BBa_K2015010BBa_K2015010 Version 1 (Component)Self-Assembling Region (SAR) for circulation
BBa_I13101BBa_I13101 Version 1 (Component)cII Self-coupled Inverter
BBa_I13102BBa_I13102 Version 1 (Component)Lac Self-coupled Inverter
BBa_K772101BBa_K772101 Version 1 (Component)Self-Destruction Kit: Endolysin + Holin
BBa_K774003BBa_K774003 Version 1 (Component)Comparator Circuit Part 2
BBa_K774002BBa_K774002 Version 1 (Component)Comparator Circuit Part 1
BBa_K774200BBa_K774200 Version 1 (Component)Multiplicative Circuit Construct 1
BBa_K1442039BBa_K1442039 Version 1 (Component)P2A self-cleaving peptide sequence
BBa_K1820003BBa_K1820003 Version 1 (Component)P335-Φ31phage genetic switch-divergent promoter + native RBS
BBa_I13100BBa_I13100 Version 1 (Component)c1 Self-coupled Inverter
BBa_I13110BBa_I13110 Version 1 (Component)Tet Self-coupled Inverter
BBa_K1510915BBa_K1510915 Version 1 (Component)ketoisocaproate decarboxylase (THI3) Circuit