iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K786002BBa_K786002 Version 1 (Component)Sensory rhodopsin II (SRII) with HtrII & Tar, sensitive to blue-green light
BBa_K786003BBa_K786003 Version 1 (Component)Sensory rhodopsin I (SRI) with HtrII & Tar, sensitive to orange light
BBa_K786001BBa_K786001 Version 1 (Component)Sensory rhodopsin II (SRII) with HtrII & Tsr, sensitive to blue-green light
BBa_K786005BBa_K786005 Version 1 (Component)Light triggering gene expression with sensory rhodopsin I & II (SRI & SRII)
BBa_K786010BBa_K786010 Version 1 (Component)Gene expression for sensory rhodopsin I & II (SRI & SRII)
const.BBa_R1075 Version 1 (Component)Constitutive Promoter II
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
TriIBBa_K1152005 Version 1 (Component)Expression cassette for NRPS synthesizing a Phe-Orn-Leu-Tripeptide
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
cI857BBa_J06503 Version 1 (Component)Lambda cI857 (Lambda II) (RBS- LVA+)
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K1728020BBa_K1728020 Version 1 (Component)Rhodopsin signaling peptide (bovine)
BBa_K317001BBa_K317001 Version 1 (Component)HtrII (NpHtrII)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_M36042BBa_M36042 Version 1 (Component)EfeU elemental iron (II) transporter
BBa_K1072009BBa_K1072009 Version 1 (Component)Bovine rhodopsin signalling pipetide
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
sRIPBBa_K237003 Version 1 (Component)RIP +export signal (OmpA). Quorum sensing inhibitor of Staphylococcus spp. (Including MRSA)
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
BBa_K317000BBa_K317000 Version 1 (Component)SRII (NpSRII)
BBa_M36414BBa_M36414 Version 1 (Component)Pb (II) Sensor
BBa_K1728023BBa_K1728023 Version 1 (Component)LUCY rhodopsin signalling peptide
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_M36726BBa_M36726 Version 1 (Component)Type II Signal Peptide
Lov-tetRBBa_K785000 Version 1 (Component)Lov-tetR (light sensor with Ptet repression) light->PtetO repressed
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)
BBa_K1092006BBa_K1092006 Version 1 (Component)Voltage sensor peptide
BBa_K1445001BBa_K1445001 Version 1 (Component)Endogenous Type II CRISPR-Cas9 phagemid