Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
MtaBO_9029 Version 1 (Component) BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K1321138BBa_K1321138 Version 1 (Component)Metallothionein SmtA with T7 promoter
BBa_K1321120BBa_K1321120 Version 1 (Component)SmtA metallothionein fused to linker-dCBD
SmtABBa_K1620007 Version 1 (Component)Synechococcus metallothionenin A (SmtA)
Smt3BBa_K1362429 Version 1 (Component)ubiquitin-like protein Smt3
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K519011BBa_K519011 Version 1 (Component)SmtA-Double Term.
BBa_K1505001BBa_K1505001 Version 1 (Component)RBS+smtA+mCherry
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
BBa_K1895998BBa_K1895998 Version 1 (Component)SmtA metallothionein and LVA tag.
BBa_M36968BBa_M36968 Version 1 (Component)Modified SMTa protein
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_K1321122BBa_K1321122 Version 1 (Component)Smt fused to CBDcex
sytABO_32681 Version 1 (Component) BBa_K1332007BBa_K1332007 Version 1 (Component)SmtA designed for circularization
BBa_K1332013BBa_K1332013 Version 1 (Component)SmtA semi-permanent generator
BBa_K1509000BBa_K1509000 Version 1 (Component)Coding for the trans-acting regulator SmtB
Smt3-mDNMTBBa_K1362500 Version 1 (Component)Smt3-Murine DNMT1(731-1602) fusion protein (with His6)
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
BBa_K1440088BBa_K1440088 Version 1 (Component)long parts consist of part2 and part3
BBa_K1321121BBa_K1321121 Version 1 (Component)Smt metallothionein fused to CBDclos
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
nadEBBa_K1373000 Version 1 (Component)This part encodes NAD synthetase
BBa_J70019BBa_J70019 Version 1 (Component)PsrI Right Testing Part for LASR parts
CircSortA*BBa_K1362003 Version 1 (Component)Sortase A circularization construct (with Smt3 and His6)
BBa_K209019BBa_K209019 Version 1 (Component)Aar1 A-B part, PLCdelta-PH (Dictyostelium discoideum)
BBa_K190029BBa_K190029 Version 1 (Component)SmtA with low constitutive promoter
BBa_K1321126BBa_K1321126 Version 1 (Component)linker-CBDcipA-linker + metallothionein SmtA
BBa_K1321123BBa_K1321123 Version 1 (Component)Metallothionein SmtA + linker-CBDcipA-linker
BBa_K190030BBa_K190030 Version 1 (Component)SmtA with lacI regulated promotor