Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SpacerSpacer Version 1 (Component) pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
spaRSpaR Version (Component) BBa_K2116090BBa_K2116090 Version 1 (Component)Spacer for BB assembly
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K2116093BBa_K2116093 Version 1 (Component)Spacer for BB assembly
BBa_K2116091BBa_K2116091 Version 1 (Component)Spacer for BB assembly
BBa_K2116092BBa_K2116092 Version 1 (Component)Spacer for BB assembly
BBa_K1159993BBa_K1159993 Version 1 (Component)25/25 Assembly Scar
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K2116094BBa_K2116094 Version 1 (Component)Salis RBS for BB assembly
BBa_K1824889BBa_K1824889 Version 1 (Component)A Transcriptional Spacer Sequence
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_K1321300BBa_K1321300 Version 1 (Component)pSEVA331-Bb - pSEVA331 with biobrick prefix and suffix
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_I759002BBa_I759002 Version 1 (Component)pTet-spacer-cro
BBa_I759001BBa_I759001 Version 1 (Component)pTet-spacer-N
pTG262-BBBBa_I742123 Version 1 (Component)Multi-host vector pTG262 converted to BioBrick vector
SpacerBBa_J176039 Version 1 (Component)Spacer
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
spacerBBa_K1362426 Version 1 (Component)Random sequence
BBa_K1123011BBa_K1123011 Version 1 (Component)Spacer Sequence
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
BBa_K648029BBa_K648029 Version 1 (Component)OR, operating region for Lambda switch