Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
ATGATG Version 1 (Component) Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1583018BBa_K1583018 Version 1 (Component)SpyCatcher without startcodon + His-tag
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
HisTagBBa_J18909 Version 1 (Component)His tag (6xHis; E. coli - optimized)
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_I13600BBa_I13600 Version 1 (Component)Tet with CFP reporter (without LVA tag)
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
BBa_I13601BBa_I13601 Version 1 (Component)Lac operator with CFP reporter (without LVA tag) [R/Lc-]
BBa_K1583059BBa_K1583059 Version 1 (Component)His-tag without start codon
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BBa_K726003BBa_K726003 Version 1 (Component)T7 promoter + lac operator + His tag
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
BBa_K1332002BBa_K1332002 Version 1 (Component)Histidine tag (8 AA) and RFP (without stop codon)
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
polyABBa_J176009 Version 1 (Component)polyA2
BBa_K1189009BBa_K1189009 Version 1 (Component)Beta-lactamase with His Tag
BBa_K2144009BBa_K2144009 Version 1 (Component)Sequence for His6-tag and LPXTGG-tag
BBa_J70048BBa_J70048 Version 1 (Component)6his part for use with BioScaffold parts ATG-GGATCC (glycine serine)-6 His-TAA
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_K1123012BBa_K1123012 Version 1 (Component)His-Tag and Thrombine Cleavage Site
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_K322123BBa_K322123 Version 1 (Component)Phycobilin synthesis operon without terminator
BBa_K654058BBa_K654058 Version 1 (Component)Thioesterase (TesA from E. coli) with 8-His Tag
BBa_J04051BBa_J04051 Version 1 (Component)RFP with tag