Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

pT7
BBa_I719005 Version 1 (Component)
T7 Promoter

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

BBa_I712074
BBa_I712074 Version 1 (Component)
T7 promoter (strong promoter from T7 bacteriophage)

BBa_B0016
BBa_B0016 Version 1 (Component)
Terminator (T7 RNAP specific, T_Phi)

T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

BBa_I2032
BBa_I2032 Version 1 (Component)
T7 RNA polymerase

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_K199118
BBa_K199118 Version 1 (Component)
T7 promoter + RBS + RFP

BBa_I741005
BBa_I741005 Version 1 (Component)
XylR Transcriptional Regulator Right Facing

BLp
BBa_K238013 Version 1 (Component)
Exact promoter of the blue light receptor

BBa_Z0293
BBa_Z0293 Version 1 (Component)
T7 Right End

BBa_K592016
BBa_K592016 Version 1 (Component)
B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS

BBa_R0085
BBa_R0085 Version 1 (Component)
T7 Consensus Promoter Sequence

BBa_B0013
BBa_B0013 Version 1 (Component)
TE from coliphage T7 (+/-)

BBa_R0182
BBa_R0182 Version 1 (Component)
T7 RNAP promoter

T7stop
BBa_J18913 Version 1 (Component)
T7 terminator (incl. STOP)

T7start
BBa_J18912 Version 1 (Component)
T7 promoter + RBS + START

T7
BBa_K145014 Version 1 (Component)
T7 RNA Polymerase with UmuD derived tag

BBa_R0184
BBa_R0184 Version 1 (Component)
T7 promoter (lacI repressible)

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

BBa_K784002
BBa_K784002 Version 1 (Component)
T7 Terminator

BBa_I741018
BBa_I741018 Version 1 (Component)
Right facing promoter (for xylF) controlled by xylR and CRP-cAMP

BBa_K731721
BBa_K731721 Version 1 (Component)
T7 terminator

YF1
BBa_K592004 Version 1 (Component)
YF1 blue-light sensor protein

BBa_K415506
BBa_K415506 Version 1 (Component)
pTRE-Tight L4R1 MammoBlock

T7pol
BBa_K145001 Version 1 (Component)
T7 RNA polymerase

BBa_M1001
BBa_M1001 Version 1 (Component)
Right mosaic end for Tn5 transpososome

rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

BBa_K608002
BBa_K608002 Version 1 (Component)
strong Promoter and strong RBS

BBa_K322124
BBa_K322124 Version 1 (Component)
Red light sensor Cph8 (from Coliroid) with RBS

BBa_Z0292
BBa_Z0292 Version 1 (Component)
T7 Left End

pT7
BBa_K2150031 Version 1 (Component)
T7 promoter without RBS

BBa_K863005
BBa_K863005 Version 1 (Component)
ecol laccase from E. coli with T7 promoter, RBS and His-tag

BBa_K360021
BBa_K360021 Version 1 (Component)
LovTAP: Blue Light Photosensor and Transcriptional Regulator