SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_K1212005BBa_K1212005 Version 1 (Component)TALe Binding Site 2 (specific to TAL repressor 2)
TALBBa_K1033000 Version 1 (Component)Tyrosine ammonia-lyase (TAL) with RBS
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K747095BBa_K747095 Version 1 (Component)TAL-Protein_TT6_Direpeat
BBa_K747094BBa_K747094 Version 1 (Component)TAL-Protein_TG6_Direpeat
BBa_K782069BBa_K782069 Version 1 (Component)10x[TALA+TALB] operator
BBa_K1189035BBa_K1189035 Version 1 (Component)TALE B and EHEC 2 target
BBa_K1189006BBa_K1189006 Version 1 (Component)TALEA and TALEB Target
BBa_K782073BBa_K782073 Version 1 (Component)10x[TALA+TALB] operator_CMV promoter_BFP
BBa_K782078BBa_K782078 Version 1 (Component)10x[TALA+TALB] operator_CMV promoter_2xBFP:NLS
BBa_K782086BBa_K782086 Version 1 (Component)10x[TALA+TALB] operator_minimal promoter
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
BBa_K782028BBa_K782028 Version 1 (Component)10x[TALA+TALB] operator_minimal promoter_mCitrine
BBa_K782032BBa_K782032 Version 1 (Component)10x[TALA+TALB] operator_minimal promoter_fLuciferase
BBa_K782016BBa_K782016 Version 1 (Component)10x[TALA+TALB] operator_CMV promoter_mCitrine
BBa_K782026BBa_K782026 Version 1 (Component)7x[TALA+TALB] operator_minimal promoter_mCitrine
BBa_K782019BBa_K782019 Version 1 (Component)10x[TALA+TALB] operator_CMV promoter_fLuciferase
BBa_K782036BBa_K782036 Version 1 (Component)10x[TALA+TALB] operator_CMV promoter_TALD:NLS:KRAB
BBa_K1212003BBa_K1212003 Version 1 (Component)TALe Binding Site 1 (specific to TAL repressor 1)
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
TagEBO_11088 Version 1 (Component) BBa_K747012BBa_K747012 Version 1 (Component)TAL-Protein_TA1_Direpeat
BBa_K747091BBa_K747091 Version 1 (Component)TAL-Protein_GT6_Direpeat
BBa_K1461238BBa_K1461238 Version 1 (Component)sigma factors cross-talk assay 2
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
galEBO_32680 Version 1 (Component) GalEBO_26840 Version 1 (Component) Lin-2BO_9115 Version 1 (Component) BBa_K1861304BBa_K1861304 Version 1 (Component)Homologous recombination site 2 and TALE3 binding site
TALE3BBa_K1861701 Version 1 (Component)TALE that binds the sequence T CCGACTCGCTGT
TALE1BBa_K1861501 Version 1 (Component)TALE that binds the sequence T CTCCACCCCATT