Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_I9026BBa_I9026 Version 1 (Component)rhlI translational unit
CouplingCoupling Version 1 (Component)Translational coupler
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1631000BBa_K1631000 Version 1 (Component)Translational unit of Barnase
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K606013BBa_K606013 Version 1 (Component)SpoVG RFPmCherry double terminator. Translational unit for B. Subtilis
BBa_K1631005BBa_K1631005 Version 1 (Component)Translational unit of Barstar (Barnase immunity protein)
BBa_K1319020BBa_K1319020 Version 1 (Component)Translational unit of mRFP-galectin3-his
BBa_K1631002BBa_K1631002 Version 1 (Component)Translational unit of Colicin-E3
BBa_K1172904BBa_K1172904 Version 1 (Component)Rnase Ba (Barnase) from Bacillus amyloliquefaciens
BBa_K1631004BBa_K1631004 Version 1 (Component)Tlanslational unit of Immunity protein for Colicin-E3
BBa_K1300005BBa_K1300005 Version 1 (Component)ccdB Translational Unit (with RBS)
BBa_I716211BBa_I716211 Version 1 (Component)Barnase active peptide
BBa_K608151BBa_K608151 Version 1 (Component)translational unit of pcyA
BBa_J90001BBa_J90001 Version 1 (Component)BCP translational unit
BBa_K1631003BBa_K1631003 Version 1 (Component)Tlanslational unit of Colicin Lysis Protein (for colicin-E3)
BBa_K1223005BBa_K1223005 Version 1 (Component)cI translational unit
BBa_K1523102BBa_K1523102 Version 1 (Component)The translational unit of yieF
BBa_K1523103BBa_K1523103 Version 1 (Component)The translational unit of yieF
BBa_K1058002BBa_K1058002 Version 1 (Component)Translational unit of penicillinase repressor blaI
BBa_T6001BBa_T6001 Version 1 (Component)test translational unit
BBa_K1151035BBa_K1151035 Version 1 (Component)Hpn translational unit
BBa_J45396BBa_J45396 Version 1 (Component)BAT2 enzyme translational unit
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
TSSBBa_B0042 Version 1 (Component)Translational stop sequence
BBa_K173013BBa_K173013 Version 1 (Component)pdc translational unit (RBS B0030)
BBa_K173014BBa_K173014 Version 1 (Component)adhB translational unit (RBS B0030)
BBa_K175042BBa_K175042 Version 1 (Component)GFP-LVA translational unit + I-SceI RS + TetR generator
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites