Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

scar
BBa_J176041 Version 1 (Component)
Silver scar

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

BBa_J92210
BBa_J92210 Version 1 (Component)
Tunable Band Pass Filter

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_K208014
BBa_K208014 Version 1 (Component)
GFP (Silver Fusion)/Double Terminator

BBa_K1031021
BBa_K1031021 Version 1 (Component)
Hybrid Promoter for Band-pass Filter

BBa_K2116017
BBa_K2116017 Version 1 (Component)
super folder green fluorescent protein

BBa_K145215
BBa_K145215 Version 1 (Component)
FILTER Key (TetR promoter + key)

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

BBa_K817016
BBa_K817016 Version 1 (Component)
parS site

rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

BBa_K608002
BBa_K608002 Version 1 (Component)
strong Promoter and strong RBS

BBa_K1537015
BBa_K1537015 Version 1 (Component)
35S promoter+translation initiation optimized sequence for dicot+Mass translation enhancer

BBa_K323107
BBa_K323107 Version 1 (Component)
PBSII zinc finger + linker

BBa_K208006
BBa_K208006 Version 1 (Component)
HlyA Signal Peptide - Silver Fusion Compatible

mCherry
BBa_J06702 Version 1 (Component)
mCherry, bacterial with RBS and forward terminator

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_K081005
BBa_K081005 Version 1 (Component)
constitutive promoter family member and RBS

BBa_K307101
BBa_K307101 Version 1 (Component)
parS

cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

BBa_K174003
BBa_K174003 Version 1 (Component)
Heritable, Tunable, Stochastic Switch

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

BBa_I13458
BBa_I13458 Version 1 (Component)
promoter C and arabinose C operon

BBa_K145217
BBa_K145217 Version 1 (Component)
FILTER Complete

BBa_K323105
BBa_K323105 Version 1 (Component)
Zif268 zinc finger + linker

BBa_K145264
BBa_K145264 Version 1 (Component)
test FILTER (new)

BBa_K145265
BBa_K145265 Version 1 (Component)
test FILTER (old)

AG4
BBa_M10023 Version 1 (Component)
{˂AG4˃} Silver binding peptide

BBa_J11020
BBa_J11020 Version 1 (Component)
Tunable Temperature Sensor

BBa_M47008
BBa_M47008 Version 1 (Component)
Time-Delay Input Filter

BBa_K208003
BBa_K208003 Version 1 (Component)
OmpA Signal Peptide - Silver Fusion Compatible

BBa_K208004
BBa_K208004 Version 1 (Component)
PelB Signal Peptide - Silver Fusion Compatible

Killer
BBa_S03430 Version 1 (Component)
B0034 J08001 B0021

BBa_J15301
BBa_J15301 Version 1 (Component)
Pars promoter from Escherichia coli chromosomal ars operon.

BBa_M1025
BBa_M1025 Version 1 (Component)
RBS and HIV Zn finger and PhaA pathway

cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

BBa_M45133
BBa_M45133 Version 1 (Component)
Chromate and Uranium Reductase, ChrR30 Silver-fusion compatible