iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
PBS_F24PBS_F24 Version 1 (Component) Up RcnABBa_K119007 Version 1 (Component)Upper primer for RcnA
VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_K119004BBa_K119004 Version 1 (Component)Upper primer for aiiA with normal lacZ promoter
Primer aiiBBa_K119005 Version 1 (Component)Upper primer for aiiA with mutated lacZ promoter
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K549038BBa_K549038 Version 1 (Component)Promotor prcnA of rcnA with RcnR-binding site and 50nt rcnA
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
rcsABBa_K137113 Version 1 (Component)rcsA
CFP/YFP-fBBa_G00200 Version 1 (Component)Forward primer for sequencing composite parts; binds to CFP/YFP (BBa_E0020/22, BBa_E0030/32)
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K119008BBa_K119008 Version 1 (Component)Lower primer for RcnA (BBa_K119003)
BBa_K1688016BBa_K1688016 Version 1 (Component)Nah7 - Upper naphthalene breakdown pathway
RcnA/RcnRBBa_K549001 Version 1 (Component)Ni(II) dependent rcnA-promoter and GFP
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
Prefix-RBBa_G1001 Version 1 (Component)Reverse primer for amplifying BioBrick plasmid backbones by PCR (Prefix-r)
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
Prefix-RBBa_G1003 Version 1 (Component)Reverse primer for amplifying BioBrick plasmid backbones by PCR (Prefix-r)
M13-R(-26)BBa_G00104 Version 1 (Component)M13-R (-26)
M13-F(-20)BBa_G00103 Version 1 (Component)M13-F (-20)
SP6BBa_G00109 Version 1 (Component)SP6 promoter sequencing primer, 24-mer
BBa_G00400BBa_G00400 Version 1 (Component)Forward Primer to C0040
BBa_G00401BBa_G00401 Version 1 (Component)Reverse Primer to C0040
BBa_K1441014BBa_K1441014 Version 1 (Component)DNA ligase Ecor1 F primer
T7BBa_G00113 Version 1 (Component)T7 promoter sequencing primer, 20-mer
BBa_G00701BBa_G00701 Version 1 (Component)Reverse primer for I0500 (pBAD)
T3BBa_G00110 Version 1 (Component)T3 promoter sequencing primer, 17-mer