Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K1935005BBa_K1935005 Version 1 (Component)White collar-2 (WC-2) - photoreceptor in Neurospora tetrasperma
BBa_K1935003BBa_K1935003 Version 1 (Component)White collar-1 (WC-1) - photoreceptor in Neurospora tetrasperma
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
CRY2BBa_K1592015 Version 1 (Component)photoreceptor cryptochrome 2 (CRY2)
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
BBa_K1935016BBa_K1935016 Version 1 (Component)White Collar 2 under the control of pU6 promoter in C.elegans (pU6::WC2)
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
Lin-2BO_9115 Version 1 (Component) "Eye 2"BBa_K1080011 Version 1 (Component)ChlI2
2/3GlyBBa_K1362467 Version 1 (Component)other 2/3Gly
BBa_K500001BBa_K500001 Version 1 (Component)lignin degradation 2
Lock 2BBa_J01011 Version 1 (Component)Riboregulator Lock 2
Key 2BBa_J01009 Version 1 (Component)Riboregulator Key 2
BBa_K1399007BBa_K1399007 Version 1 (Component)GFP (mut3b) with SsrA-DAS+2 degradation tag
BBa_K1982002BBa_K1982002 Version 1 (Component)Prokaryotic Cryptochrome 2 (CRY2) ( a blue light stimulated photoreceptor)
BBa_K1982009BBa_K1982009 Version 1 (Component)Eukaryotic Cryptochrome 2 (CRY2) ( a blue light stimulated photoreceptor)
BBa_K203111BBa_K203111 Version 1 (Component)Constitutive promoter; 2 REU
BBa_K1763440BBa_K1763440 Version 1 (Component)MaSp1/2[1:1]-12(1C3)
BBa_I13513BBa_I13513 Version 1 (Component)Screening Plasmid 2
BBa_K1150040BBa_K1150040 Version 1 (Component)uniCAS RNAimer to Bla Target 2
EFEBBa_K1065000 Version 1 (Component)<html>2-oxoglutarate oxygenase/decarboxylase (EFE)</html>
BBa_K1666000BBa_K1666000 Version 1 (Component)LsrA of LuxS/AI-2 signaling pathway in Salmonalla
2/3GlyBBa_K1362464 Version 1 (Component)2/3Gly
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1666004BBa_K1666004 Version 1 (Component)LsrK of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666001BBa_K1666001 Version 1 (Component)LsrB of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666003BBa_K1666003 Version 1 (Component)LsrD of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666002BBa_K1666002 Version 1 (Component)LsrC of LuxS/AI-2 signaling pathway in Salmonalla
BBa_K1666005BBa_K1666005 Version 1 (Component)LsrR of LuxS/AI-2 signaling pathway in Salmonalla
BBa_J11007BBa_J11007 Version 1 (Component)completed 2 color temperature sensor
BBa_K1351029BBa_K1351029 Version 1 (Component)LMU Bacillus RBS collection 2
BBa_K1499202BBa_K1499202 Version 1 (Component)Deinococcus radiodurans uracil-DNA glycosylase 2