ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

tADH1
BBa_J63002 Version 1 (Component)
ADH1 terminator from S. cerevisiae

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_K801012
BBa_K801012 Version 1 (Component)
ADH1 yeast terminator

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K173003
BBa_K173003 Version 1 (Component)
pdc and adhB protein generator

BBa_K173019
BBa_K173019 Version 1 (Component)
adhB protein generator

BBa_K398018
BBa_K398018 Version 1 (Component)
ADH generator

BBa_K392003
BBa_K392003 Version 1 (Component)
yeast ADH1 terminator

AAR
BBa_K590032 Version 1 (Component)
Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942

P0310
BBa_J63005 Version 1 (Component)
yeast ADH1 promoter

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

BBa_I711038
BBa_I711038 Version 1 (Component)
aad/adhE generator

adh2
BBa_K273005 Version 1 (Component)
Alcohol Dehydrogenase 2 (adh2 , adhII, adhB) from <i>S. cerevisiae</i>

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

BBa_K106018
BBa_K106018 Version 1 (Component)
Adh1 terminator

BBa_K1486025
BBa_K1486025 Version 1 (Component)
ADH1 Terminator

BBa_I1466
BBa_I1466 Version 1 (Component)
RhlR protein generator (LVA-)

adhB
BBa_K173017 Version 1 (Component)
alcohol dehydrogenase II from Z. mobilis (codon optimized for E. coli)

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

NLS+Term
BBa_K165018 Version 1 (Component)
SV40 nuclear localization sequence + ADH1 transcription terminator

BBa_K081012
BBa_K081012 Version 1 (Component)
GFP protein generator - PoPS->GFP

BBa_I711039
BBa_I711039 Version 1 (Component)
aad2/adhe1 generator

BBa_K145201
BBa_K145201 Version 1 (Component)
INPUT TetR generator

BBa_K173020
BBa_K173020 Version 1 (Component)
adhB and pdc protein generator

BBa_M36709
BBa_M36709 Version 1 (Component)
Gemini Protein Generator

BBa_J37019
BBa_J37019 Version 1 (Component)
AHL induced LuxR generator

adh2
BBa_K273001 Version 1 (Component)
Alcohol dehydrogenase (adh2 , adhII, adhB) from <i>Z. Mobilis</i> ATCC 29191

BBa_K081016
BBa_K081016 Version 1 (Component)
lasI protein generator - PoPS->lasI

BBa_K081009
BBa_K081009 Version 1 (Component)
lasI protein generator (TERM-)

BBa_K516030
BBa_K516030 Version 1 (Component)
mRFP protein generator TERM+ RBS+(B0030)

BBa_K081008
BBa_K081008 Version 1 (Component)
luxI protein generator (TERM-)

BBa_I711019
BBa_I711019 Version 1 (Component)
Butyryl-CoA -> Butanol (adhe, adhe1)

ldhE-Lc
BBa_K1696001 Version 1 (Component)
L-Lactate producing module from Lactobacillus casei