Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1502003BBa_K1502003 Version 1 (Component)accD portion of Acyl-CoA Ligase
BBa_K1502002BBa_K1502002 Version 1 (Component)accB portion of Acyl-CoA Ligase
BBa_K1502001BBa_K1502001 Version 1 (Component)accA portion of Acyl-CoA Ligase
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K861020BBa_K861020 Version 1 (Component)FadE ,acyl-CoA dehydrogenase
BBa_K654065BBa_K654065 Version 1 (Component)Fatty Acyl-CoA Synthetase (Ligase) + Terminator
BBa_K861010BBa_K861010 Version 1 (Component)FadD, an inner membrane-associated acyl-CoA synthase
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_K654071BBa_K654071 Version 1 (Component)psbA2 controlled Fatty Acyl-CoA Synthetase (Ligase)
BBa_K654077BBa_K654077 Version 1 (Component)sigA controlled Fatty Acyl-CoA Synthetase (Ligase)
BBa_K1129004BBa_K1129004 Version 1 (Component)acyl-CoA ligase (EncH) from Streptomyces maritimus
BBa_K654060BBa_K654060 Version 1 (Component)Fatty Acyl-CoA Reductase with 8-His Tag
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_K670000BBa_K670000 Version 1 (Component)LuxC (acyl-CoA reductase)
BBa_K654059BBa_K654059 Version 1 (Component)Fatty Acyl-CoA Synthetase (Ligase) (fadD from E. coli) with 8-His Tag
BBa_K1076004BBa_K1076004 Version 1 (Component)FadD, Long-chain-fatty-acid-CoA ligase
BBa_K1076003BBa_K1076003 Version 1 (Component)FadD, Long-chain-fatty-acid-CoA ligase
BBa_K654066BBa_K654066 Version 1 (Component)Fatty Acyl-CoA Reductase + Terminator
BBa_K1587001BBa_K1587001 Version 1 (Component)acyl-CoA thioesterase 2
BBa_K499595BBa_K499595 Version 1 (Component)luxC gene encoding acyl coA reductase
BBa_K499999BBa_K499999 Version 1 (Component)luxC gene encoding acyl coA reductase
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_I72512BBa_I72512 Version 1 (Component)Enoyl-coa hydratase
BBa_I725013BBa_I725013 Version 1 (Component)Butyryl CoA dehyrogenase
BBa_M36931BBa_M36931 Version 1 (Component)E. coli enoyl-[acyl-carrier-protien] reductase
LigABBa_K525710 Version 1 (Component)DNA ligase from Escherichia coli (LigA) with PT7, RBS and His-tag
BBa_K654087BBa_K654087 Version 1 (Component)sigA controlled Thioesterase + Acyl-CoA Synthetase
BBa_K654078BBa_K654078 Version 1 (Component)sigA controlled Fatty Acyl-CoA Reductase
BBa_K654082BBa_K654082 Version 1 (Component)psbA2 controlled Thioesterase + Acyl-CoA Synthetase
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_I769104BBa_I769104 Version 1 (Component)Feruloyl CoA hydratase for vanillin biosythesis