Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_K382063BBa_K382063 Version 1 (Component)amiRNA LYC knockdown in Kan plant expression vector
BBa_K382060BBa_K382060 Version 1 (Component)amiRNA LYC knockdown in Basta plant expression vector
BBa_K382061BBa_K382061 Version 1 (Component)amiRNA LUT2 knockdown in Kan plant expression vector
BBa_K382065BBa_K382065 Version 1 (Component)amiRNA LTP knockdown in Kan plant expression vector
BBa_K382055BBa_K382055 Version 1 (Component)amiRNA GFP knockdown 1 in Kan plant expression vector
BBa_K382057BBa_K382057 Version 1 (Component)amiRNA GFP knockdown 2 in Kan plant expression vector
BBa_K382062BBa_K382062 Version 1 (Component)amiRNA beta-Ohase 1 knockdown in Kan plant expression vector
BBa_K382064BBa_K382064 Version 1 (Component)amiRNA LTP knockdown in Basta plant expression vector
BBa_K382058BBa_K382058 Version 1 (Component)amiRNA LUT2 knockdown in Basta plant expression vector
BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_K382054BBa_K382054 Version 1 (Component)amiRNA GFP knockdown 1 in Basta plant expression vector
BBa_K382056BBa_K382056 Version 1 (Component)amiRNA GFP knockdown 2 in Basta plant expression vector
BBa_K382059BBa_K382059 Version 1 (Component)amiRNA beta-Ohase 1 knockdown in Basta plant expression vector
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
BBa_K382067BBa_K382067 Version 1 (Component)intron hairpin RNAi knockdown of Ger allergen in Kan plant vector
BBa_K382071BBa_K382071 Version 1 (Component)intron hairpin RNAi knockdown of LTP allergen in Kan plant vector
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K382069BBa_K382069 Version 1 (Component)intron hairpin RNAi knockdown of Bet v 1 allergen in Kan plant vector
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
BBa_K382053BBa_K382053 Version 1 (Component)Arabidopsis optimized Brazzeing (in plant Kan vector)
BBa_K382066BBa_K382066 Version 1 (Component)intron hairpin RNAi knockdown of Ger allergen in Basta plant vector
BBa_K382070BBa_K382070 Version 1 (Component)intron hairpin RNAi knockdown of LTP allergen in Basta plant vector
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K382068BBa_K382068 Version 1 (Component)intron hairpin RNAi knockdown of Bet v 1 allergen in Basta plant vector
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
pLacBBa_K1638000 Version 1 (Component)Lac operator
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BBa_K382052BBa_K382052 Version 1 (Component)Arabidopsis optimized Brazzein (in plant Basta vector)
BBa_K299502BBa_K299502 Version 1 (Component)Expression vector J23100+B0032
BBa_K299501BBa_K299501 Version 1 (Component)Expression vector J23100+B0031
lucBBa_K389004 Version 1 (Component)Luciferase from pGL4.10[luc2]
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
pSB1A2pSB1A2 Version 1 (Component)pSB1A2 (Replaced by pSB1A3)
BBa_K299503BBa_K299503 Version 1 (Component)Expression vector J23100+B0033