ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
GFP reportBBa_E0240 Version 1 (Component)GFP generator
GFP generaBBa_E0840 Version 1 (Component)GFP generator
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
//rnaprnap Version 1 (Collection) //dnadna Version 1 (Collection) BBa_K313034BBa_K313034 Version 1 (Component)as RNA generator 2
BBa_K115003BBa_K115003 Version 1 (Component)RNA thermometer (PrfA)
BBa_K346000BBa_K346000 Version 1 (Component)RBS(B0032)+T3 DNA-directed RNA polymerase
BBa_I0466BBa_I0466 Version 1 (Component)RhlR Protein Generator
BBa_K313026BBa_K313026 Version 1 (Component)as RNA target2
BBa_K313033BBa_K313033 Version 1 (Component)as RNA generator 1
BBa_K313024BBa_K313024 Version 1 (Component)as RNA target1
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
BBa_K516022BBa_K516022 Version 1 (Component)AiiA protein generator TERM+ RBS+(B0032)
BBa_K738002BBa_K738002 Version 1 (Component)Theophyline riboswitch regulated RNA Scaffold (clover vision 2)
BBa_I1466BBa_I1466 Version 1 (Component)RhlR protein generator (LVA-)
BBa_K1448007BBa_K1448007 Version 1 (Component)ERG20-2 generator
BBa_K081012BBa_K081012 Version 1 (Component)GFP protein generator - PoPS->GFP
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K145201BBa_K145201 Version 1 (Component)INPUT TetR generator
BBa_K1499202BBa_K1499202 Version 1 (Component)Deinococcus radiodurans uracil-DNA glycosylase 2
BBa_M36709BBa_M36709 Version 1 (Component)Gemini Protein Generator
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K1368011BBa_K1368011 Version 1 (Component)Spinach Aptamer 13-2 RNA with Stabilizing tRNA Scaffold
BBa_K1404008BBa_K1404008 Version 1 (Component)p70-CsgA-His*2, double His-tagged curli generator
BBa_K115017BBa_K115017 Version 1 (Component)RNA thermometer (ROSE 32??C)