iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
cinIBBa_C0076 Version 1 (Component)autoinducer synthetase
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
rhIIBBa_C0170 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL (no LVA)
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
aiiABBa_C0160 Version 1 (Component)autoinducer inactivation enzyme aiiA (no LVA)
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
RhIBBa_I14017 Version 1 (Component)P(Rhl)
BBa_K1673403BBa_K1673403 Version 1 (Component)AHL Autoinducer Synthetase (Mutation Optimized)
BBa_K199123BBa_K199123 Version 1 (Component)autoinducer synthetase for AHL (no LVA) + Unique Site
BBa_K199125BBa_K199125 Version 1 (Component)LuxI autoinducer synthetase optimized for E. coli
BBa_J28031BBa_J28031 Version 1 (Component)lux autoinducer
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_C0260BBa_C0260 Version 1 (Component)autoinducer inactivation enzyme, AaiiA (+RBS)
BBa_J28032BBa_J28032 Version 1 (Component)las autoinducer
sinIBBa_K594001 Version 1 (Component)a luxI homologous AHL synthetase from Sinorhizobium meliloti 1021
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
CqsABBa_K356000 Version 1 (Component)CAI-1 autoinducer synthase
raiIBBa_K594007 Version 1 (Component)a luxI homologous AHL synthetase from Rhzobium etli CFN 42
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
rhiIBBa_K594005 Version 1 (Component)a luxI homologous AHL synthetase from Rhzobium leguminosarum bv. vicae IMA57
BBa_M50027BBa_M50027 Version 1 (Component)LuxS Synthase for Autoinducer-2 Pathway in E. coli
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K118002BBa_K118002 Version 1 (Component)crtB coding sequence encoding phytoene synthase
BBa_K249002BBa_K249002 Version 1 (Component)Lumazine Synthase
BBa_K1960054BBa_K1960054 Version 1 (Component)GFP reporter and Self-induced synthetase for AHL
BBa_K1165009BBa_K1165009 Version 1 (Component)CepI AHL Synthase
BBa_K546000BBa_K546000 Version 1 (Component)Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria