iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
rhIIBBa_C0170 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL (no LVA)
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
RhlR+C4BBa_R0071 Version 1 (Component)Promoter (RhlR & C4-HSL regulated)
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
cinIBBa_C0076 Version 1 (Component)autoinducer synthetase
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
cinRBBa_R0078 Version 1 (Component)Promoter (cinR and HSL regulated)
RhIBBa_I14017 Version 1 (Component)P(Rhl)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
cinRBBa_R0077 Version 1 (Component)Promoter (cinR and HSL regulated, RBS+)
FurBO_11498 Version 1 (Component) BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K1073019BBa_K1073019 Version 1 (Component)Autoinducer synthetase RhlI ( producing N-butyryl-HSL) with RBS and double terminator
luxRBBa_R0061 Version 1 (Component)Promoter (HSL-mediated luxR repressor)
aiiABBa_C0160 Version 1 (Component)autoinducer inactivation enzyme aiiA (no LVA)
BBa_F1700BBa_F1700 Version 1 (Component)N-butyryl-HSL Sender Device
BBa_F2710BBa_F2710 Version 1 (Component)N-butyryl-HSL Receiver Device
BBa_K145150BBa_K145150 Version 1 (Component)Hybrid promoter: HSL-LuxR activated, P22 C2 repressed
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K1673403BBa_K1673403 Version 1 (Component)AHL Autoinducer Synthetase (Mutation Optimized)
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K199123BBa_K199123 Version 1 (Component)autoinducer synthetase for AHL (no LVA) + Unique Site
BBa_K1073018BBa_K1073018 Version 1 (Component)Autoinducer synthetase LasI ( producing N-3-oxododecanoyl-HSL) with RBS and double terminator
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_K649001BBa_K649001 Version 1 (Component)GFP regulated by 3OC12-HSL and LasR
BBa_K1073011BBa_K1073011 Version 1 (Component)Inducible ampicillin resistance cassette (regulated by RhlR + N-buturyl-HSL)
BBa_K199125BBa_K199125 Version 1 (Component)LuxI autoinducer synthetase optimized for E. coli
BBa_I725013BBa_I725013 Version 1 (Component)Butyryl CoA dehyrogenase
sinIBBa_K594001 Version 1 (Component)a luxI homologous AHL synthetase from Sinorhizobium meliloti 1021
BBa_I724000BBa_I724000 Version 1 (Component)Autoinducer inactivation enzyme regulated by LuxR/HSL promoter
BBa_J28031BBa_J28031 Version 1 (Component)lux autoinducer
BBa_I13263BBa_I13263 Version 1 (Component)Lux Receiver (HSL & R0063 driven)