Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B1001
BBa_B1001 Version 1 (Component)
Terminator (artifical, small, %T~=90)

BBa_I757012
BBa_I757012 Version 1 (Component)
bla_frag2 (aa 200-290) Fusion Part

BBa_B1006
BBa_B1006 Version 1 (Component)
Terminator (artificial, large, %T~>90)

BBa_I757011
BBa_I757011 Version 1 (Component)
bla_frag1(aa 26-199) Fusion Part

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

linker
BBa_K365005 Version 1 (Component)
20 aa linker RFC-25 (fusion standard Freiburg)

BBa_K208014
BBa_K208014 Version 1 (Component)
GFP (Silver Fusion)/Double Terminator

BBa_K209021
BBa_K209021 Version 1 (Component)
Aar1 A-B part, PI3K (aa170-290) (Dictyostelium discoideum)

linker
BBa_K133132 Version 1 (Component)
8 aa protein domain linker

BBa_K105012
BBa_K105012 Version 1 (Component)
10 aa flexible protein domain linker

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

AA
BBa_K1362465 Version 1 (Component)
Double A (2x the nucleotide Adenine)

BBa_S01640
BBa_S01640 Version 1 (Component)
Intermediate part from assembly 240

BBa_I15010
BBa_I15010 Version 1 (Component)
cph8 (Cph1/EnvZ fusion)

BBa_E0051
BBa_E0051 Version 1 (Component)
lacZa.GFP fusion

BBa_K125500
BBa_K125500 Version 1 (Component)
GFP fusion brick

yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion

ClpX
BBa_K365004 Version 1 (Component)
ClpX from E.coli (aa 61-425)

BBa_K209400
BBa_K209400 Version 1 (Component)
AarI B-C part, hM4D

BBa_S01411
BBa_S01411 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01415
BBa_S01415 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01413
BBa_S01413 Version 1 (Component)
Intermediate part from assembly 240

BBa_K137047
BBa_K137047 Version 1 (Component)
250 bp inverted tetR promoter

pET fusion
BBa_K1122673 Version 1 (Component)
Ethanol production module

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K249006
BBa_K249006 Version 1 (Component)
Fusion EYFP with C-terminal Arginine Tag

BBa_J36837
BBa_J36837 Version 1 (Component)
Outer membrane protein A, aa 46-159

BBa_S01818
BBa_S01818 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01430
BBa_S01430 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01427
BBa_S01427 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01428
BBa_S01428 Version 1 (Component)
Intermediate part from assembly 240

BBa_S01431
BBa_S01431 Version 1 (Component)
Intermediate part from assembly 240

mCherry
BBa_K165004 Version 1 (Component)
mCherry, yeast optimized for fusion

BBa_S01639
BBa_S01639 Version 1 (Component)
Intermediate part from assembly 240

BBa_K315021
BBa_K315021 Version 1 (Component)
TetA (DeOptimized from bp 144 to 290)

BBa_K315020
BBa_K315020 Version 1 (Component)
TetA (Optimized from bp 144 to 290)

fusion
BBa_I12200 Version 1 (Component)
Lambda cI - Gal4 fusion protein

BBa_J24736
BBa_J24736 Version 1 (Component)
56. 20(BBa_J24698)==29(BBa_J24709)

BBa_S01849
BBa_S01849 Version 1 (Component)
Intermediate part from assembly 240

BBa_K315040
BBa_K315040 Version 1 (Component)
TetA (Optimized from bp 1to 290)

BBa_K1583113
BBa_K1583113 Version 1 (Component)
pAra + fusion protein BFP_Spycatcher_His

EbfS Aa
BBa_K1060002 Version 1 (Component)
EBF synthase from Artemisia annua