Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ccdBBBa_P1010 Version 1 (Component)ccdB cell death gene
GerEBO_11469 Version 1 (Component) ccdBBBa_K145151 Version 1 (Component)ccdB coding region
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
ccdBBBa_I1000 Version 1 (Component)ccd Gene - Causes cell death
BBa_K145110BBa_K145110 Version 1 (Component)Cell death mechanism
ccdBBBa_P1016 Version 1 (Component)ccdB cassette without ccdA-
BBa_K873013BBa_K873013 Version 1 (Component)cujugative transfer death gene
BBa_K145256BBa_K145256 Version 1 (Component)CELL DEATH Part 1
BBa_K145257BBa_K145257 Version 1 (Component)CELL DEATH Part 2
BBa_J08001BBa_J08001 Version 1 (Component)-- Death --
BBa_K1467203BBa_K1467203 Version 1 (Component)GoldenGate compatible Bax - cell death inducer
BBa_J22101BBa_J22101 Version 1 (Component)Lac Y gene
OmpABBa_K103006 Version 1 (Component)OmpA outer membrane protein A fused to linker; displays proteins on cell surface
BBa_K176063BBa_K176063 Version 1 (Component)PoPS->RBS(weak)+lacZalpha-ccdB+T
BBa_K176062BBa_K176062 Version 1 (Component)PoPS->RBS(weak)+ccdB+T
BBa_K1667004BBa_K1667004 Version 1 (Component)suicide gene ccdB
lacZa-ccdBBBa_K176003 Version 1 (Component)lacZalpha-ccdB coding sequence
BBa_K1075032BBa_K1075032 Version 1 (Component)ccdA - Antitoxin in ccdA/ccdB system
BBa_K414005BBa_K414005 Version 1 (Component)ccdB minimal gene
lsrRBBa_K091001 Version 1 (Component)LsrR gene
lsrKBBa_K091002 Version 1 (Component)LsrK gene
ccdABBa_J32004 Version 1 (Component)CcdA
BBa_M45125BBa_M45125 Version 1 (Component)F-Plasmid OriT with Autolysin for Cell Death Induced Conjugation
BBa_J33201BBa_J33201 Version 1 (Component)E. coli chromosomal ars promoter with arsR repressor gene
RFC105 CCBBa_K1362419 Version 1 (Component)C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
BBa_J33204BBa_J33204 Version 1 (Component)xylE reporter gene with rbs
BBa_K624033BBa_K624033 Version 1 (Component)minC cell division inhibitor (revised)
BBa_K1028002BBa_K1028002 Version 1 (Component)A cell membrane stress reporter gene
BBa_K176035BBa_K176035 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.70->luxR+pLux/Tet->ccdB
BBa_I750016BBa_I750016 Version 1 (Component)Gas Vesicle polycistonic gene
BBa_K1325005BBa_K1325005 Version 1 (Component)MinC??????cell division inhibitor
ATF1 generBBa_J45199 Version 1 (Component)Banana odor enzyme (ATF1) generator
BBa_K176036BBa_K176036 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_K176167BBa_K176167 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.70->luxR+pLux/Tet->ccdB-LVA
BBa_K176089BBa_K176089 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.70->luxR+pLux/Tet->ccdB(weak RBS)
CCBDBBa_M45405 Version 1 (Component)Human Fibronectin
BBa_K176168BBa_K176168 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.70->luxR+pLux/Tet->lacZalpha-ccdB-LVA
BBa_K176187BBa_K176187 Version 1 (Component)TetR repressible AHL->Death Receiver: pCon 0.04->luxR+pLux/Tet->ccdB(weak RBS)