Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_K115003BBa_K115003 Version 1 (Component)RNA thermometer (PrfA)
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K118003BBa_K118003 Version 1 (Component)crtI coding sequence encoding phytoene dehydrogenase
BBa_K115023BBa_K115023 Version 1 (Component)construction of K115003 expression
BBa_K115028BBa_K115028 Version 1 (Component)construction of K115020 expression
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_K115022BBa_K115022 Version 1 (Component)construction of K115002 expression
BBa_K115021BBa_K115021 Version 1 (Component)construction of K115001 expression
BBa_K115025BBa_K115025 Version 1 (Component)construction of K115009 expression
BBa_K1150038BBa_K1150038 Version 1 (Component)uniCAS RNAimer to target VEGF3
BBa_K1150037BBa_K1150037 Version 1 (Component)uniCAS RNaimer to target VEGF2
BBa_K1150039BBa_K1150039 Version 1 (Component)uniCAS RNAimer to target VEGF4
BBa_K115024BBa_K115024 Version 1 (Component)construction of K115008 test expression
BBa_K115026BBa_K115026 Version 1 (Component)construction of K115016 expression
BBa_K115027BBa_K115027 Version 1 (Component)construction of K115017 expression
BBa_K1150036BBa_K1150036 Version 1 (Component)uniCAS RNAimer to target VEGF1
BBa_K1150035BBa_K1150035 Version 1 (Component)uniCAS RNAimer to EMX1
RNAimerBBa_K1150034 Version 1 (Component)dCas RNA plasmid: "uniCAS RNAimer"
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_S04447BBa_S04447 Version 1 (Component)K315008:B0034
BBa_S05232BBa_S05232 Version 1 (Component)K1150010:K1150012
BBa_K115009BBa_K115009 Version 1 (Component)RNA thermometer (FourU)
BBa_K575004BBa_K575004 Version 1 (Component)Continuous expression of LasR receptor protein (with RBS, B0030)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K115031BBa_K115031 Version 1 (Component)Expression of luciferase with RNA-thermometer K115003
BBa_I722007BBa_I722007 Version 1 (Component)Constructive expression LacI(p tetR)