iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_J23116BBa_J23116 Version 1 (Component)constitutive promoter family member
BBa_K1632001BBa_K1632001 Version 1 (Component)fim switch[default OFF](Tokyo_Tech/J23119)
BBa_K1632003BBa_K1632003 Version 1 (Component)fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp
BBa_K1632000BBa_K1632000 Version 1 (Component)fim switch[deault ON](Tokyo_Tech/J23119)
BBa_J23109BBa_J23109 Version 1 (Component)constitutive promoter family member
BBa_J23118BBa_J23118 Version 1 (Component)constitutive promoter family member
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_K1632008BBa_K1632008 Version 1 (Component)fim switch[default OFF](wild-type)_rbs_gfp
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_K1632006BBa_K1632006 Version 1 (Component)fim switch[default ON](Tokyo_Tech/R0010)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J23113BBa_J23113 Version 1 (Component)constitutive promoter family member
BBa_K1632002BBa_K1632002 Version 1 (Component)fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp
BBa_K1632005BBa_K1632005 Version 1 (Component)fim switch[default OFF](wild-type)
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member
BBa_J23112BBa_J23112 Version 1 (Component)constitutive promoter family member
BBa_K1632031BBa_K1632031 Version 1 (Component)fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_rhlI
BBa_K1632033BBa_K1632033 Version 1 (Component)fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_lasI
BBa_J23105BBa_J23105 Version 1 (Component)constitutive promoter family member
BBa_J23111BBa_J23111 Version 1 (Component)constitutive promoter family member
BBa_K1632030BBa_K1632030 Version 1 (Component)fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp_rbs_rhlI
BBa_K1632032BBa_K1632032 Version 1 (Component)fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp_rbs_lasI
BBa_J23108BBa_J23108 Version 1 (Component)constitutive promoter family member
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K1632007BBa_K1632007 Version 1 (Component)fim switch[default ON](wild-type)_rbs_gfp
BBa_J23115BBa_J23115 Version 1 (Component)constitutive promoter family member
BBa_J23117BBa_J23117 Version 1 (Component)constitutive promoter family member
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J23107BBa_J23107 Version 1 (Component)constitutive promoter family member