SynBioHub

Public

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Public

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Public

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

Public

BBa_B0010
BBa_B0010 Version 1 (Component)
T1 from E. coli rrnB

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Public

BBa_B0015
BBa_B0015 Version 1 (Component)
double terminator (B0010-B0012)

Public

p(tetR)
BBa_R0040 Version 1 (Component)
TetR repressible promoter

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

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lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

Public

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

Public

BBa_B0010_sequence
BBa_B0010_sequence Version 1 (Sequence)

Public

BBa_K1632006
BBa_K1632006 Version 1 (Component)
fim switch[default ON](Tokyo_Tech/R0010)

Public

BBa_K1632000
BBa_K1632000 Version 1 (Component)
fim switch[deault ON](Tokyo_Tech/J23119)

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_K1632001
BBa_K1632001 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)

Public

BBa_R0040_sequence
BBa_R0040_sequence Version 1 (Sequence)

Public

BBa_K1632003
BBa_K1632003 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp

Public

AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

Public

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

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BBa_R0010_sequence
BBa_R0010_sequence Version 1 (Sequence)

Public

BBa_K1632005
BBa_K1632005 Version 1 (Component)
fim switch[default OFF](wild-type)

Public

tetR
BBa_Q04400 Version 1 (Component)
QPI (B0034.C0040.B0015.R0040)

Public

BBa_B0017
BBa_B0017 Version 1 (Component)
double terminator (B0010-B0010)

Public

BBa_K1632002
BBa_K1632002 Version 1 (Component)
fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp

Public

BBa_K1632030
BBa_K1632030 Version 1 (Component)
fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp_rbs_rhlI

Public

BBa_K1632032
BBa_K1632032 Version 1 (Component)
fim switch[default ON](Tokyo_Tech/J23119)_rbs_gfp_rbs_lasI

Public

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

Public

BBa_K1632008
BBa_K1632008 Version 1 (Component)
fim switch[default OFF](wild-type)_rbs_gfp

Public

BBa_K1632004
BBa_K1632004 Version 1 (Component)
fim switch[default ON](wild-type)

Public

BBa_K1632031
BBa_K1632031 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_rhlI

Public

BBa_K1632033
BBa_K1632033 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_lasI

Public

cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

Public

fimE IRL
BBa_K137010 Version 1 (Component)
fimE IRL

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BBa_K1632007
BBa_K1632007 Version 1 (Component)
fim switch[default ON](wild-type)_rbs_gfp

Public

BBa_Q01121
BBa_Q01121 Version 1 (Component)
QPI (B0031.C0012.B0015.R0011)

Public

BBa_K137007
BBa_K137007 Version 1 (Component)
fimE

Public

IRR
BBa_K137008 Version 1 (Component)
fimE IRR

Public

BBa_K1795002
BBa_K1795002 Version 1 (Component)
R0010 gRNA under R0040

Public

engfimS
BBa_K1077005 Version 1 (Component)
J23100 fim switch ON orientation

Public

BBa_K1850013
BBa_K1850013 Version 1 (Component)
pAra - fim

Public

BBa_K1077007
BBa_K1077007 Version 1 (Component)
J23100 fim switch b0034 amilCP ON orientation

Public

BBa_J04605
BBa_J04605 Version 1 (Component)
R0010 with Anti-Sense Theophillline Induced Antiswitch ("On Switch")

Public

BBa_K1632011
BBa_K1632011 Version 1 (Component)
fimE (wild-type)

Public

BBa_K1632010
BBa_K1632010 Version 1 (Component)
fimB (wild-type)

Public

BBa_S05055
BBa_S05055 Version 1 (Component)
R0010:P0451

Public

BBa_K137058
BBa_K137058 Version 1 (Component)
GFP fimE switch with 250 bp tetR promoter

Public

BBa_I714044
BBa_I714044 Version 1 (Component)
[R0010][I714031]

Public

BBa_K1077004
BBa_K1077004 Version 1 (Component)
natural fim switch OFF orientation

Public

BBa_J70607
BBa_J70607 Version 1 (Component)
R0010 + B0034 (-BsaXI site in R0010)

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