iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_J35001BBa_J35001 Version 1 (Component)fork hairpin
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_S00162BBa_S00162 Version 1 (Component)mCherry + 3' Hairpin + Terminator
BBa_K115020BBa_K115020 Version 1 (Component)RNA thermometer (ROSE hairpin 37??C)
BBa_M45001BBa_M45001 Version 1 (Component)Hairpin Loop
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
dumbbellBBa_J35002 Version 1 (Component)dumbbell hairpin
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K1218022BBa_K1218022 Version 1 (Component)50bp24CC Hairpin Nanowire
BBa_I13579BBa_I13579 Version 1 (Component)1/2 Insert/hairpin (I13457)
BBa_I13570BBa_I13570 Version 1 (Component)RFP with 5' hairpin
BBa_S00161BBa_S00161 Version 1 (Component)GFP + 3' Hairpin + Terminator
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
Ag43+FLAG-BBa_K1352002 Version 1 (Component)Ag43+FLAG+MCS(-)beta-hairpins under pBAD promoter
BBa_K1352012BBa_K1352012 Version 1 (Component)Ag43+FLAG+MCS(-)beta-hairpins
BBa_I13571BBa_I13571 Version 1 (Component)5' Hairpin RFP w Terminator
BBa_K1442041BBa_K1442041 Version 1 (Component)MS2 bacteriophage protein binding box (hairpin)
BBa_I13576BBa_I13576 Version 1 (Component)pR + RFP with 5' hairpin.
BBa_I13572BBa_I13572 Version 1 (Component)Ptet + RFP with 5' hairpin.
BBa_K115018BBa_K115018 Version 1 (Component)RNA thermometer (ROSE hairpin 27??C)
BBa_K115019BBa_K115019 Version 1 (Component)RNA thermometer (ROSE hairpin 32??C)
BBa_K1963003BBa_K1963003 Version 1 (Component)A template for expression of sRNA fusions to the Serratia chiA hairpin
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
BBa_M1207BBa_M1207 Version 1 (Component)Temperature Sensitive Hairpin Loop + Tet Repressor
BBa_I13575BBa_I13575 Version 1 (Component)pR + RFP with 5' hairpin + Terminator
BBa_I13573BBa_I13573 Version 1 (Component)Ptet + RFP with 5' hairpin + Terminator
BBa_M45014BBa_M45014 Version 1 (Component)Hairpin designed to silence canine F1 allergen 2
BBa_K1963002BBa_K1963002 Version 1 (Component)A template for expression of sRNA fusions to the E. coli micC hairpin
Pveg-spoVGBBa_K143053 Version 1 (Component)Promoter Pveg and RBS spoVG for B. subtilis
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)