Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K382067BBa_K382067 Version 1 (Component)intron hairpin RNAi knockdown of Ger allergen in Kan plant vector
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
GerEBO_11469 Version 1 (Component) BBa_K382066BBa_K382066 Version 1 (Component)intron hairpin RNAi knockdown of Ger allergen in Basta plant vector
BBa_K382071BBa_K382071 Version 1 (Component)intron hairpin RNAi knockdown of LTP allergen in Kan plant vector
BBa_K382070BBa_K382070 Version 1 (Component)intron hairpin RNAi knockdown of LTP allergen in Basta plant vector
BBa_K382069BBa_K382069 Version 1 (Component)intron hairpin RNAi knockdown of Bet v 1 allergen in Kan plant vector
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K382068BBa_K382068 Version 1 (Component)intron hairpin RNAi knockdown of Bet v 1 allergen in Basta plant vector
rrnOrrnO_ter Version (Component) BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K382061BBa_K382061 Version 1 (Component)amiRNA LUT2 knockdown in Kan plant expression vector
BBa_K382065BBa_K382065 Version 1 (Component)amiRNA LTP knockdown in Kan plant expression vector
BBa_K382063BBa_K382063 Version 1 (Component)amiRNA LYC knockdown in Kan plant expression vector
//rnaprnap Version 1 (Collection) BBa_K382055BBa_K382055 Version 1 (Component)amiRNA GFP knockdown 1 in Kan plant expression vector
BBa_K382057BBa_K382057 Version 1 (Component)amiRNA GFP knockdown 2 in Kan plant expression vector
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K382062BBa_K382062 Version 1 (Component)amiRNA beta-Ohase 1 knockdown in Kan plant expression vector
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K382064BBa_K382064 Version 1 (Component)amiRNA LTP knockdown in Basta plant expression vector
BBa_K382060BBa_K382060 Version 1 (Component)amiRNA LYC knockdown in Basta plant expression vector
BBa_K382058BBa_K382058 Version 1 (Component)amiRNA LUT2 knockdown in Basta plant expression vector
BBa_K382054BBa_K382054 Version 1 (Component)amiRNA GFP knockdown 1 in Basta plant expression vector
BBa_K382056BBa_K382056 Version 1 (Component)amiRNA GFP knockdown 2 in Basta plant expression vector
IntronBBa_J176014 Version 1 (Component)Intron