Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
mSA2BBa_K1896000 Version 1 (Component)Monomeric Streptavidin (mSA2)
eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
HisBBa_K128005 Version 1 (Component)His affinity tag
BclA-HisBBa_K1933000 Version 1 (Component)N-terminal domain of BclA protein fused to 6xHis tag
HisBBa_M0021 Version 1 (Component)Poly-His affinity tag
Hin LVABBa_J31001 Version 1 (Component)DNA invertase Hin tagged with LVA
His-Sc_Si4BBa_K1602030 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_K1989002BBa_K1989002 Version 1 (Component)Triplespytag with mSA and His-tag
HisBBa_K112703 Version 1 (Component)His affinity tag
HisBBa_I757013 Version 1 (Component)His affinity tag
BBa_K1491005BBa_K1491005 Version 1 (Component)RBS-SuperYFP2-His
BBa_K1791003BBa_K1791003 Version 1 (Component)6X end terminally His tagged MS2 coat protein
BBa_K1896015BBa_K1896015 Version 1 (Component)mGFPuv2-mSA2 generator
BBa_K1896013BBa_K1896013 Version 1 (Component)INP_NC-mSA2 generator
BBa_K1896018BBa_K1896018 Version 1 (Component)INP_RC-mSA2 generator
RBS-His-ScBBa_K1602031 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein with RBS BBa_B0034
HR-HisBBa_K1642001 Version 1 (Component)Codon-optimized Halorhodopsin with His-tag
BBa_I712015BBa_I712015 Version 1 (Component)HIV-1 protease cleavage site
His6BBa_K1362458 Version 1 (Component)Hexahistidine tag
xisBBa_K112200 Version 1 (Component){xis!} from bacteriophage lambda; assembly standard 21
MSABBa_K1392932 Version 1 (Component)4-hydroxy-2-ketovalerate aldolase
BBa_J52000BBa_J52000 Version 1 (Component)This is the part which robin has created
BBa_K313013BBa_K313013 Version 1 (Component)loading sequence of RNA phage MS2 (reverse)
BBa_K1404007BBa_K1404007 Version 1 (Component)p70-CsgA-His, His-tagged curli generator
BBa_K1491007BBa_K1491007 Version 1 (Component)RBS-mOrange-His
BBa_M36127BBa_M36127 Version 1 (Component)MS2 aptamer
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BBa_K799029BBa_K799029 Version 1 (Component)MFA2 Terminator
Met-HisBBa_K133035 Version 1 (Component)Methionine-His affinity tag
BBa_K165006BBa_K165006 Version 1 (Component)Zif268-HIV DNA-binding domain