Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
BBa_K902024BBa_K902024 Version 1 (Component)moa Operon (MoaABCDE)
BBa_K902087BBa_K902087 Version 1 (Component)moa Operon (MoaABCDE)-J04500
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
MorABBa_K1615000 Version 1 (Component)Morphine-6-dehydrogenase RFC25
MaoABBa_K1615022 Version 1 (Component)Monoamine Oxidase A RFC25
motABBa_K1463700 Version 1 (Component)MotA
MtaBO_9029 Version 1 (Component) BBa_K322123BBa_K322123 Version 1 (Component)Phycobilin synthesis operon without terminator
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
Operon2BBa_K808007 Version 1 (Component)putative terephtalate uptake operon2
ModABBa_K1405002 Version 1 (Component)ModA
BBa_K909000BBa_K909000 Version 1 (Component)Phycocyanobilin synthesis operon
MAOBBa_K1618001 Version 1 (Component)MAO without inducible promoter
BBa_K1499000BBa_K1499000 Version 1 (Component)wssF gene from wss operon
hycApBBa_K778000 Version 1 (Component)hycAp: Promoter of hyc operon activated by FhlA
PrFeBBa_J3902 Version 1 (Component)PrFe (PI + PII rus operon)
BBa_K769020BBa_K769020 Version 1 (Component)lux operon(K769011) + lumP(K769019)
BBa_K769022BBa_K769022 Version 1 (Component)lux operon(K769011) + GFP(I13522)
BBa_K1795024BBa_K1795024 Version 1 (Component)KanR Operon under R0010
BBa_K729003BBa_K729003 Version 1 (Component)csgBAEFG operon
BBa_I72512BBa_I72512 Version 1 (Component)Enoyl-coa hydratase
BBa_I725013BBa_I725013 Version 1 (Component)Butyryl CoA dehyrogenase
MoaDBO_9202 Version 1 (Component) BBa_K822000BBa_K822000 Version 1 (Component)lldPRD operon promoter + RBS from E. coli
BBa_K804005BBa_K804005 Version 1 (Component)DszC coding gene (from DszABC operon)
moaEBO_29689 Version 1 (Component) moaDBO_29690 Version 1 (Component) BBa_K1897037BBa_K1897037 Version 1 (Component)Modified lldPRD operon promoter
BBa_K325909BBa_K325909 Version 1 (Component)Lux Operon (under pBAD)<BR><i>Vibrio Fischeri</i>
mobABO_29685 Version 1 (Component) MoaEBO_9181 Version 1 (Component) MoeABO_9277 Version 1 (Component) moeABO_29687 Version 1 (Component) BBa_K1497007BBa_K1497007 Version 1 (Component)Naringenin producing operon
BBa_I769104BBa_I769104 Version 1 (Component)Feruloyl CoA hydratase for vanillin biosythesis
moaBBO_31542 Version 1 (Component) mtaBO_31520 Version 1 (Component) MotABO_9171 Version 1 (Component) MoaBBO_9759 Version 1 (Component) moaABO_31757 Version 1 (Component) MoxABO_7040 Version 1 (Component)