Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
<partinfo>BBa_K1697001 Version 1 (Component)moved to <partinfo>BBa_K1697002 </partinfo>
BBa_K1699002BBa_K1699002 Version 1 (Component)gRNA for SaCas9 targeting human ubiquitin B gene
BBa_K317030BBa_K317030 Version 1 (Component)<partinfo>P(J23102)-RBS(B0034)-pduP_GFP-Term(B0015) </partinfo>
BBa_K1497002BBa_K1497002 Version 1 (Component)B0034-eANS (engineered anthocyanidin synthase with strong RBS)
BBa_K1197000BBa_K1197000 Version 1 (Component)Anti MazF - Antisense RNA to inhibit MazF activity in B.subtilis
BBa_K1027002BBa_K1027002 Version 1 (Component)Delta 12 Desaturase, optimised for expression in Escherichia coli
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
BBa_K1667002BBa_K1667002 Version 1 (Component)opdA coding sequence
BBa_K1695002BBa_K1695002 Version 1 (Component)RBS + Bacteriophage 21 codon optimized S gene
sfCFPBBa_K1093002 Version 1 (Component)sfCFP
BBa_K1197004BBa_K1197004 Version 1 (Component)RBS SpoVG + LacI + DT
BBa_K1067002BBa_K1067002 Version 1 (Component)Cytochrome A and X from Nitrosomonas europaea
BBa_K1096002BBa_K1096002 Version 1 (Component)MazF protein (E. coli)
BBa_K1696002BBa_K1696002 Version 1 (Component)L-Lactate producing module from Geobacillus stearothermophilus
BBa_K1690002BBa_K1690002 Version 1 (Component)Mating pheromone (C. tropicalis)
BBa_K1627002BBa_K1627002 Version 1 (Component)Device to demethylate 7-methylxanthine
BBa_K1897002BBa_K1897002 Version 1 (Component)HasR Membrane receptor coding sequence
SboABBa_K1697000 Version 1 (Component)SboA from B.subtilis 168
BBa_K1967002BBa_K1967002 Version 1 (Component)1_AB BabbleBrick (1.5)
BBa_K1697002BBa_K1697002 Version 1 (Component)Toggle switch for gram positive
BBa_K1657002BBa_K1657002 Version 1 (Component)It is called TAB. It have the resistance to glyphosate and the 2, 4-Dichlorophenoxyacetic acid
BBa_K1692002BBa_K1692002 Version 1 (Component)codon optimized FDC with T7 promoter and Flag Tag
BBa_K1607002BBa_K1607002 Version 1 (Component)HER2-extracellular domain mutant 1
BBa_K1698002BBa_K1698002 Version 1 (Component)BaseHunter : Activated to become detector for 62bp target sequence on SRY gene
BBa_K1597002BBa_K1597002 Version 1 (Component)tasA, amyloid-like fibers
BBa_K1197001BBa_K1197001 Version 1 (Component)Anti MazF construct (pHyperspank + Anti MazF + Double Terminator)
BBa_K1197002BBa_K1197002 Version 1 (Component)pHyperspank + Anti MazF
106GFPBBa_K1679002 Version 1 (Component)GFP Reporter
BBa_K1087002BBa_K1087002 Version 1 (Component)T7 promoter-B0034-amilCP
BBa_K1687002BBa_K1687002 Version 1 (Component)EC 1.7.7.2 + E0240
BBa_K1362470BBa_K1362470 Version 1 (Component)sfGFP_T65C sequence (Mutated <partinfo>BBa_I746917</partinfo>)