Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
msfGFPmsfGFP Version 1 (Component) BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_B0011BBa_B0011 Version 1 (Component)LuxICDABEG (+/-)
GFP reportBBa_E0240 Version 1 (Component)GFP generator
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
CcpABO_11480 Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LexABO_11408 Version 1 (Component) Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
ComKBO_11197 Version 1 (Component) BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed
BBa_J52642BBa_J52642 Version 1 (Component)Green Flourescence Protein
SpoIILBO_26996 Version 1 (Component) AbrBBO_9091 Version 1 (Component) BBa_K2116017BBa_K2116017 Version 1 (Component)super folder green fluorescent protein
GerEBO_11469 Version 1 (Component) BBa_E0044BBa_E0044 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212)
TnrABO_11240 Version 1 (Component) SpoIIIDBO_9027 Version 1 (Component) FurBO_11498 Version 1 (Component) PhoPBO_26226 Version 1 (Component) EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_B0024BBa_B0024 Version 1 (Component)double terminator (B0012-B0011), reversed
BFPBBa_K592100 Version 1 (Component)Blue Fluorescent Protein (mTagBFP)
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_K1943010BBa_K1943010 Version 1 (Component)msfGFP, green fluorescence protein reporter system
BBa_B0017BBa_B0017 Version 1 (Component)double terminator (B0010-B0010)
tetRBBa_Q04400 Version 1 (Component)QPI (B0034.C0040.B0015.R0040)
YFPBBa_K592101 Version 1 (Component)Yellow Fluorescent Protein (YFP)
BBa_K1943011BBa_K1943011 Version 1 (Component)msfGFP+B0015, green fluorescence protein reporter system
sfGFPBBa_K1943008 Version 1 (Component)sfGFP, green fluorescence protein reporter system
BBa_K1943009BBa_K1943009 Version 1 (Component)sfGFP+B0015, green fluorescence protein reporter system