Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_F2620
BBa_F2620 Version 1 (Component)
3OC₆HSL -> PoPS Receiver

BBa_K179002
BBa_K179002 Version 1 (Component)
mtlD which catalyses epimerization of D-Fluctose-6-phosphate

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

BBa_F2622
BBa_F2622 Version 1 (Component)
3OC₆HSL Receiver Device

BBa_K1674004
BBa_K1674004 Version 1 (Component)
zwf - Glucose-6-Phosphate-Dehydrogenase from E.coli

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_K118011
BBa_K118011 Version 1 (Component)
PcstA (glucose-repressible promoter)

BBa_K209399
BBa_K209399 Version 1 (Component)
AarI A-D acceptor vector

BBa_F2621
BBa_F2621 Version 1 (Component)
3OC₆HSL Receiver Device

cheZ
BBa_K629003 Version 1 (Component)
cheZ, chemotaxis regulator, protein phosphatase for CheY

BBa_M36124
BBa_M36124 Version 1 (Component)
Glucose-6-Phosphate Isomerase for manipulation of glycolysis in yeast

BBa_I766007
BBa_I766007 Version 1 (Component)
YopH, Rev. MAPK Tyr Phosphatase

BBa_K737023
BBa_K737023 Version 1 (Component)
Promoter that can be induced by phosphate.

MorA
BBa_K1615000 Version 1 (Component)
Morphine-6-dehydrogenase RFC25

"D"
BBa_K1080002 Version 1 (Component)
ChlD

BBa_K557001
BBa_K557001 Version 1 (Component)
Aptamer-CheZ: theophylline-sensitive synthetic riboswitch+phosphatase which dephosphorylates CheY-P

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

dxs
BBa_K118000 Version 1 (Component)
dxs coding sequence encoding 1-deoxyxylulose-5-phosphate synthase

BBa_K826000
BBa_K826000 Version 1 (Component)
cytochrome which catalyzes the terminal oxidation of alkanes

BBa_K737026
BBa_K737026 Version 1 (Component)
Promoter that can be induced by phosphate and carbon starvation.

BBa_K106017
BBa_K106017 Version 1 (Component)
AarI "D" site scar sequence

BBa_K861140
BBa_K861140 Version 1 (Component)
GalU,glucose-1-phosphate uridylyltransferase

BBa_K116401
BBa_K116401 Version 1 (Component)
external phosphate sensing promoter

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins

RFP2
BBa_I715023 Version 1 (Component)
Carboxyl portion of RFP

BBa_K554008
BBa_K554008 Version 1 (Component)
Hemolysin D - HlyD

BBa_K1619002
BBa_K1619002 Version 1 (Component)
hps (3-hexulose-6-phosphate synthase)

BBa_I711030
BBa_I711030 Version 1 (Component)
cellobiose -> beta-D-glucose (cellobiase) (bgl3C)

PT7-D
BBa_I716106 Version 1 (Component)
T7 Promoter (Mutant D)

BBa_K771206
BBa_K771206 Version 1 (Component)
Vio D with Membrane Anchor 6

BBa_K1763426
BBa_K1763426 Version 1 (Component)
MaSp2-6(1C3)