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Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Public
iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1
Public
SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Public
Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Public
Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source
Public
Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Public
Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.
Public
Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Public
BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030
Public
Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission
Public
pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse
Public
mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
Public
BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed
Public
BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030
Public
BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
Public
PBS_F24
PBS_F24 Version 1 (Component)

Public
mRFPr
BBa_J31008 Version 1 (Component)
RFP reverse
Public
//primer
primer Version 1 (Collection)

Public
BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030
Public
BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed
Public
VF2
BBa_G00100 Version 1 (Component)
Forward primer for sequencing/amplifying BioBrick parts (VF2)
Public
GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission
Public
BBa_K187313
BBa_K187313 Version 1 (Component)
murE ORF, Reverse Primer
Public
BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse
Public
BBa_K187304
BBa_K187304 Version 1 (Component)
mukE ORF, Reverse Primer
Public
BBa_K187309
BBa_K187309 Version 1 (Component)
murB ORF, Reverse Primer
Public
BBa_K187311
BBa_K187311 Version 1 (Component)
murC ORF, Reverse Primer
Public
BBa_K187306
BBa_K187306 Version 1 (Component)
murA ORF, Reverse Primer
Public
BBa_K187315
BBa_K187315 Version 1 (Component)
murG ORF, Reverse Primer
Public
BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter
Public
VR
BBa_G00102 Version 1 (Component)
Reverse BioBrick primer annealing site (VR binding site)
Public
BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter
Public
BBa_K228004
BBa_K228004 Version 1 (Component)
NahR( reverse) - salicylate promoter
Public
BBa_K187364
BBa_K187364 Version 1 (Component)
orn, ORF, Reverse Primer
Public
BBa_K1813019
BBa_K1813019 Version 1 (Component)
LacI Repressor Reversed
Public
BBa_K187312
BBa_K187312 Version 1 (Component)
murE ORF, Forward Primer
Public
BBa_K187119
BBa_K187119 Version 1 (Component)
folB, ORF, reverse primer
Public
BBa_K187410
BBa_K187410 Version 1 (Component)
yqgF, ORF, reverse primer
Public
BBa_K187414
BBa_K187414 Version 1 (Component)
rpsR, ORF, Reverse Primer
Public
BBa_K187336
BBa_K187336 Version 1 (Component)
lnt ORF, Reverse Primer
Public
BBa_K187274
BBa_K187274 Version 1 (Component)
rnpA ORF Reverse Primer
Showing 1 - 50 of 3294 result(s)
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