Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
pBADBBa_K206000 Version 1 (Component)pBAD strong
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
AraCBBa_R0080 Version 1 (Component)Promoter (AraC regulated)
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
GerEBO_11469 Version 1 (Component) ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_K228009BBa_K228009 Version 1 (Component)AraC protein(reversed sequence) and Pbad promoter
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K2072000BBa_K2072000 Version 1 (Component)pBAD-driven synthetic beta-glucosidase gene with araC
AraCBO_10845 Version 1 (Component) LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
BBa_K607040BBa_K607040 Version 1 (Component)reverse pBad/araC promoter
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_K118028BBa_K118028 Version 1 (Component)beta-glucosidase gene bglX (chu_2268) from Cytophaga hutchinsonii
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K731201BBa_K731201 Version 1 (Component)Arabinose inducible araC-pBAD promoter
BBa_K392008BBa_K392008 Version 1 (Component)C. firmi beta-glucosidase (Silver standard compatible)
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
BBa_K1333315BBa_K1333315 Version 1 (Component)pBAD with araC
BBa_K228012BBa_K228012 Version 1 (Component)AraC-Pbad-SupD
rbs+crtZBBa_I742158 Version 1 (Component)crtZ (beta-carotene hydroxylase) with native rbs
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
AraC O2BBa_R0081 Version 1 (Component)Inhibitor (AraC loop attachment with O2 site)
BBa_K1604020BBa_K1604020 Version 1 (Component)araC-pBAD + beta-carotene
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_M36926BBa_M36926 Version 1 (Component)Beta-glucosidase A1
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_J44002BBa_J44002 Version 1 (Component)pBAD reverse
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)