SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_I751001BBa_I751001 Version 1 (Component)pBR Biobrick-Tokyo Standard
PBS_F24PBS_F24 Version 1 (Component) BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_I13452BBa_I13452 Version 1 (Component)Adds another BioBrick site
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K121016BBa_K121016 Version 1 (Component)Tokyo Standard prefix suffix RBS
BBa_I751410BBa_I751410 Version 1 (Component)BioBrick to Tokyo Standard adapter, for SpeI, forward
BBa_I751400BBa_I751400 Version 1 (Component)BioBrick to Tokyo Standard adapter, for XbaI, forward
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_I751411BBa_I751411 Version 1 (Component)BioBrick to Tokyo Standard adapter, for SpeI, reverse
BBa_I751401BBa_I751401 Version 1 (Component)BioBrick to Tokyo Standard adapter, for XbaI, reverse
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
cI 434BBa_R1052 Version 1 (Component)Promoter, Standard (434 cI regulated)<br>
BBa_K1824890BBa_K1824890 Version 1 (Component)The Sequence of the SpeI/XbaI scar in BioBricks standard assembly.
cI HK022BBa_R1050 Version 1 (Component)Promoter, Standard (HK022 cI regulated) <br>
PrefixBBa_G00000 Version 1 (Component)BioBrick cloning site prefix
BBa_K299801BBa_K299801 Version 1 (Component)standard biobrick scar (if next sequence does NOT start with ATG)
SuffixBBa_G00001 Version 1 (Component)BioBrick cloning site suffix
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K864004BBa_K864004 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864006BBa_K864006 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864005BBa_K864005 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864000BBa_K864000 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864002BBa_K864002 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864007BBa_K864007 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864003BBa_K864003 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864001BBa_K864001 Version 1 (Component)Low copy BioBrick standard vector
pSB3K3pSB3K3 Version 1 (Component)Low to medium copy BioBrick standard vector
BBa_K1051002BBa_K1051002 Version 1 (Component)Stop codon free EYFP in RFC[23] standard
BBa_K929301BBa_K929301 Version 1 (Component)Potsdam Standard Backbone
BBa_K864014BBa_K864014 Version 1 (Component)Low copy BioBrick standard vector with LacI
BBa_K864011BBa_K864011 Version 1 (Component)Low copy BioBrick standard vector with LacI
pSB8A15FRTBBa_K864020 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
BBa_K864012BBa_K864012 Version 1 (Component)Low copy BioBrick standard vector with LacI
BBa_K864015BBa_K864015 Version 1 (Component)Low copy BioBrick standard vector with LacI
BBa_K864009BBa_K864009 Version 1 (Component)Low copy BioBrick standard vector with LacI
pSB8A15BBa_K864016 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
BBa_K864013BBa_K864013 Version 1 (Component)Low copy BioBrick standard vector with LacI
BBa_K864010BBa_K864010 Version 1 (Component)Low copy BioBrick standard vector with LacI
pSB8C15BBa_K864017 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector