Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

p15A
BBa_I50032 Version 1 (Component)
p15A replication origin

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

R6K
BBa_J61001 Version 1 (Component)
[R6K] Origin of replication

pSC101
BBa_I50042 Version 1 (Component)
pSC101 origin of replication

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS_rev) -- corresponds to BBa_B0030

OriTR
BBa_J01003 Version 1 (Component)
OriT-R (Origin of transfer for the R-plasmid nic region)

mRFPr
BBa_J31008 Version 1 (Component)
RFP reverse

pSB1A1
pSB1A1 Version 1 (Component)
pUC19 with a BioBrick cloning site (Replaced by pSB1A3)

f1 ori
BBa_K314110 Version 1 (Component)
f1 origin

pSC101
BBa_I50040 Version 1 (Component)
nonfunctional pSC101 origin of replication

BBa_K617003
BBa_K617003 Version 1 (Component)
R6K origin of replication

BBa_K864050
BBa_K864050 Version 1 (Component)
pSC101 low copy origin of replication

pSC101 ts
BBa_I50052 Version 1 (Component)
pSC101 temperature sensitive origin of replication

BBa_I714031
BBa_I714031 Version 1 (Component)
OriT-R (Origin of Transfer for the R751-plasmid nic region)

BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

BBa_K607035
BBa_K607035 Version 1 (Component)
pUC18 replication origin

BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_K640003
BBa_K640003 Version 1 (Component)
Ori1600- Pseudomonas origin of replication

BBa_K1797012
BBa_K1797012 Version 1 (Component)
pSC101 Ori-a temperature sensitive replication origin

pSC101ts
BBa_K864051 Version 1 (Component)
pSC101ts temperature sensitive low copy origin of replication

BBa_K1207000
BBa_K1207000 Version 1 (Component)
Gram positive origin of replication

BBa_K524203
BBa_K524203 Version 1 (Component)
pSC101 heat sensitive origin of replication with deletion in par locus

OriV
BBa_K125340 Version 1 (Component)
Origin of Vegetative Replication

BBa_K228004
BBa_K228004 Version 1 (Component)
NahR( reverse) - salicylate promoter

BBa_J70510
BBa_J70510 Version 1 (Component)
Mesoplasma florum origin of replication

BBa_J70504
BBa_J70504 Version 1 (Component)
Mesoplasma florum origin of replication

BBa_J70507
BBa_J70507 Version 1 (Component)
Mesoplasma florum origin of replication

pUC19 ori
BBa_I50022 Version 1 (Component)
Minimal pUC19-derived high copy replication origin

BBa_I714032
BBa_I714032 Version 1 (Component)
OriT-S (Origin of Transfer for the pSC101-plasmid nic region)