SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_K611012BBa_K611012 Version 1 (Component)pTet Characterization Construct
BBa_K611013BBa_K611013 Version 1 (Component)pLacI Characterization Construct
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_I13521BBa_I13521 Version 1 (Component)Ptet mRFP
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K611059BBa_K611059 Version 1 (Component)pTet Promoter Variant #9 in Characterization Construct
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
BBa_K611014BBa_K611014 Version 1 (Component)cI Repressible Promoter Characterization Construct
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K611010BBa_K611010 Version 1 (Component)LacI Repressor Characterization Construct
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_Q04510BBa_Q04510 Version 1 (Component)QPI (B0034.C0051.B0015.R0051)
SpacerSpacer Version 1 (Component) CouplingCoupling Version 1 (Component)Translational coupler
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
ATGATG Version 1 (Component) MCSMCS Version 1 (Component) eyfpBBa_E0031 Version 1 (Component)EYFP (RBS+ LVA-)
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_E0422BBa_E0422 Version 1 (Component)ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_K116640BBa_K116640 Version 1 (Component)pTet + RBS + LuxR + T
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_K608002BBa_K608002 Version 1 (Component)strong Promoter and strong RBS
BBa_K611009BBa_K611009 Version 1 (Component)TetR Characterization Construct
BBa_J95041BBa_J95041 Version 1 (Component)B0015 characterization construct
BBa_I759002BBa_I759002 Version 1 (Component)pTet-spacer-cro
Lov-tetRBBa_K785000 Version 1 (Component)Lov-tetR (light sensor with Ptet repression) light->PtetO repressed