iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K125502BBa_K125502 Version 1 (Component)phaB BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1993)
BBa_K125501BBa_K125501 Version 1 (Component)phaA BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1994)
p15ABBa_I50032 Version 1 (Component)p15A replication origin
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K125503BBa_K125503 Version 1 (Component)phaC BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1830)
BBa_K125504BBa_K125504 Version 1 (Component)phaE BioPlastic polyhydroxybutyrate synthesis pathway (origin PCC6803 slr1829)
f1 oriBBa_K314110 Version 1 (Component)f1 origin
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K208001BBa_K208001 Version 1 (Component)Phasin (PhaP)
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
R6KBBa_J61001 Version 1 (Component)[R6K] Origin of replication
BioplasticBBa_K156013 Version 1 (Component)phaB1 (acetyacetyl-CoA reductase)
BioplasticBBa_K156012 Version 1 (Component)phaA (acetyl-CoA acetyltransferase)
BioplasticBBa_K156014 Version 1 (Component)phaC1 (Poly(3-hydroxybutyrate) polymerase)
BBa_K759009BBa_K759009 Version 1 (Component)RBS-phaC-RBS-phaA-RBS-phaB
BBa_K1043009BBa_K1043009 Version 1 (Component)PhaC: Polyhydroxybutyrate synthase
BBa_M1032BBa_M1032 Version 1 (Component)PhaA PhaB PhaC and zinc fingers
BBa_K300002BBa_K300002 Version 1 (Component)Phasin (PhaP) - head domain
RS1BBa_K743000 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
BBa_K759005BBa_K759005 Version 1 (Component)phaB (acetoacetyl-CoA reductase orgin from Ralstonia eutropha)
RS2BBa_K743001 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K759004BBa_K759004 Version 1 (Component)phaA (beta-ketothiolase orgin from Ralstonia eutropha)
phaC1-A-B1BBa_K934001 Version 1 (Component)phaC1-A-B1 [P(3HB) synthesis]
BBa_K125100BBa_K125100 Version 1 (Component)nir promoter from <I>Synechocystis</I> sp. PCC6803
BBa_K1465302BBa_K1465302 Version 1 (Component)Isobutanol pathway
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
pSC101BBa_I50042 Version 1 (Component)pSC101 origin of replication
PCaa3BBa_K743002 Version 1 (Component)PCaa3 promoter and native rbs from Synechocystis PCC6803
BBa_K607035BBa_K607035 Version 1 (Component)pUC18 replication origin
BBa_M1025BBa_M1025 Version 1 (Component)RBS and HIV Zn finger and PhaA pathway
BBa_K592001BBa_K592001 Version 1 (Component)CcaS, green light sensor from Synechocystis sp. PCC6803
BBa_K617003BBa_K617003 Version 1 (Component)R6K origin of replication
BBa_K322123BBa_K322123 Version 1 (Component)Phycobilin synthesis operon without terminator
BBa_M1024BBa_M1024 Version 1 (Component)RBS and HIV Zn finger and PhaA pathway
BBa_K759003BBa_K759003 Version 1 (Component)phaA (beta-ketothiolase orgin from Ralstonia eutropha)
BBa_K390501BBa_K390501 Version 1 (Component)LacPromoter/RBS/PhaP/HlyA/Terminator
BBa_M1022BBa_M1022 Version 1 (Component)Zif268-HIV DNA-binding domain and PhaA pathway