iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_I13521BBa_I13521 Version 1 (Component)Ptet mRFP
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
BBa_K876015BBa_K876015 Version 1 (Component)pTet-LasR-DT
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
lasRBBa_S03954 Version 1 (Component)S03156:B0015
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K575004BBa_K575004 Version 1 (Component)Continuous expression of LasR receptor protein (with RBS, B0030)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
BBa_J70009BBa_J70009 Version 1 (Component)LASR1 (actually LASR3)
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K553003BBa_K553003 Version 1 (Component)constitutive production of LasR trans-activator
BBa_K876073BBa_K876073 Version 1 (Component)pTetR-LasR-Term-Term-pLasR-LuxS-RBS-CFP-Term-Term-pLuxR-TetR
BBa_K081016BBa_K081016 Version 1 (Component)lasI protein generator - PoPS->lasI
Lov-tetRBBa_K785000 Version 1 (Component)Lov-tetR (light sensor with Ptet repression) light->PtetO repressed
BBa_K077020BBa_K077020 Version 1 (Component)ptet with LasR
BBa_K266005BBa_K266005 Version 1 (Component)PAI+LasR -> LasI & AI+LuxR --| LasI
BBa_K1893000BBa_K1893000 Version 1 (Component)Las receiver (LasR+pLas)
BBa_I13602BBa_I13602 Version 1 (Component)Tet operator with CFP reporter (with LVA tag) [R/Tc+]
BBa_K876011BBa_K876011 Version 1 (Component)pTet-LasR-DT-pLas-LacI-RFP-ST-pLac-LuxI
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_J70011BBa_J70011 Version 1 (Component)LASR3 (actually LASR1)
BBa_K116640BBa_K116640 Version 1 (Component)pTet + RBS + LuxR + T
BBa_K077014BBa_K077014 Version 1 (Component)ptet with LuxR and LasR
BBa_K077015BBa_K077015 Version 1 (Component)ptet with LuxR and LasR
BBa_K266006BBa_K266006 Version 1 (Component)PAI+LasR -> LasI+GFP & AI+LuxR --| LasI+GFP
BBa_K575010BBa_K575010 Version 1 (Component)LasR/PAI1 Inducible Promoter + RBS (B0030) + RFP
BBa_K726010BBa_K726010 Version 1 (Component)LasR+plasR+melA
BBa_I13600BBa_I13600 Version 1 (Component)Tet with CFP reporter (without LVA tag)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)