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Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Public
iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1
Public
SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Public
Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source
Public
Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Public
Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Public
Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.
Public
Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Public
BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030
Public
Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission
Public
mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
Public
BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030
Public
tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
Public
PBS_F24
PBS_F24 Version 1 (Component)

Public
//primer
primer Version 1 (Collection)

Public
BBa_K187172
BBa_K187172 Version 1 (Component)
rplO, ORF, forward primer
Public
mCherry
BBa_J06702 Version 1 (Component)
mCherry, bacterial with RBS and forward terminator
Public
BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030
Public
BBa_K187183
BBa_K187183 Version 1 (Component)
rplP, ORF, forward primer
Public
BBa_K187287
BBa_K187287 Version 1 (Component)
rplM ORF, Forward Primer
Public
BBa_K187211
BBa_K187211 Version 1 (Component)
rplU, ORF, forward primer
Public
BBa_K187277
BBa_K187277 Version 1 (Component)
rplB ORF, Forward Primer
Public
BBa_K187220
BBa_K187220 Version 1 (Component)
rplW, ORF, forward primer
Public
BBa_K187283
BBa_K187283 Version 1 (Component)
rplE ORF, Forward Primer
Public
BBa_K187285
BBa_K187285 Version 1 (Component)
rplL ORF, Forward Primer
Public
BBa_K187222
BBa_K187222 Version 1 (Component)
rplX, ORF, forward primer
Public
BBa_K187281
BBa_K187281 Version 1 (Component)
rplD ORF, Forward Primer
Public
BBa_K187218
BBa_K187218 Version 1 (Component)
rplV, ORF, forward primer
Public
BBa_K187289
BBa_K187289 Version 1 (Component)
rplN ORF, Forward Primer
Public
BBa_K187279
BBa_K187279 Version 1 (Component)
rplC ORF, Forward Primer
Public
BBa_K187200
BBa_K187200 Version 1 (Component)
rplT. ORF, forward primer
Public
VF2
BBa_G00100 Version 1 (Component)
Forward primer for sequencing/amplifying BioBrick parts (VF2)
Public
GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission
Public
BBa_K187175
BBa_K187175 Version 1 (Component)
rplO, ORF, reverse primer
Public
BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter
Public
BBa_K187221
BBa_K187221 Version 1 (Component)
rplW, ORF, reverse primer
Public
BBa_K187284
BBa_K187284 Version 1 (Component)
rplE ORF, Reverse Primer
Public
BBa_K187290
BBa_K187290 Version 1 (Component)
rplN ORF, Reverse Primer
Public
BBa_K187219
BBa_K187219 Version 1 (Component)
rplV, ORF, reverse primer
Public
BBa_K187215
BBa_K187215 Version 1 (Component)
rplU, ORF, reverse primer
Public
BBa_K187288
BBa_K187288 Version 1 (Component)
rplM ORF, Reverse Primer
Showing 1 - 50 of 3220 result(s)
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