Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K1510102
BBa_K1510102 Version 1 (Component)
sRNA targets G protein mRNA in S.mutans

BBa_K1510007
BBa_K1510007 Version 1 (Component)
sRNA targets G protein mRNA in S.mutans

BBa_K228001
BBa_K228001 Version 1 (Component)
SupD-tRNA

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

BBa_K1510101
BBa_K1510101 Version 1 (Component)
sRNA targets histidine kinase 11 mRNA in S.mutans

BBa_K115002
BBa_K115002 Version 1 (Component)
RNA thermometer (FourU)

BBa_K115001
BBa_K115001 Version 1 (Component)
RNA thermometer (ROSE)

BBa_I2032
BBa_I2032 Version 1 (Component)
T7 RNA polymerase

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]

BBa_K1510006
BBa_K1510006 Version 1 (Component)
sRNA targets histidine kinase 11 in S.mutans

BBa_K115003
BBa_K115003 Version 1 (Component)
RNA thermometer (PrfA)

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

BBa_K1487003
BBa_K1487003 Version 1 (Component)
Guide RNA (gRNA) target for acfD

BBa_K1487000
BBa_K1487000 Version 1 (Component)
Guide RNA (gRNA) target for acfA

BBa_K1487002
BBa_K1487002 Version 1 (Component)
Guide RNA (gRNA) target for acfC

BBa_K1487020
BBa_K1487020 Version 1 (Component)
Guide RNA (gRNA) target for toxT

BBa_K1487009
BBa_K1487009 Version 1 (Component)
Guide RNA (gRNA) target for tcpD

BBa_K1487019
BBa_K1487019 Version 1 (Component)
Guide RNA (gRNA) target for tcpT

BBa_K1487010
BBa_K1487010 Version 1 (Component)
Guide RNA (gRNA) target for tcpE

BBa_K1487005
BBa_K1487005 Version 1 (Component)
Guide RNA (gRNA) target for ctxB

BBa_K1487013
BBa_K1487013 Version 1 (Component)
Guide RNA (gRNA) target for tcpI