SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_K1614013
BBa_K1614013 Version 1 (Component)
software generated kanamycin aptamer (candidate 2)

BBa_K1614017
BBa_K1614017 Version 1 (Component)
software generated kanamycin aptamer (candidate 3)

BBa_K1614009
BBa_K1614009 Version 1 (Component)
software generated kanamycin aptamer (candidate 1)

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

kanR
BBa_P1003 Version 1 (Component)
kanamycin resistance cassette

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_K1614021
BBa_K1614021 Version 1 (Component)
Software-generated p53 aptamer

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1614023
BBa_K1614023 Version 1 (Component)
Actin AptaBody with software generated actin aptamer (8mer)

BBa_K1614024
BBa_K1614024 Version 1 (Component)
Actin AptaBody with software generated actin aptamer (17mer)

BBa_K1424003
BBa_K1424003 Version 1 (Component)
Kanamycin resistance for Synechocystis

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K2027050
BBa_K2027050 Version 1 (Component)
PQQ Aptamer #2 (15ADb11)

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K1618034
BBa_K1618034 Version 1 (Component)
Acyltransferase Candidate 2 Expression Construct

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

NOR2
BBa_I732352 Version 1 (Component)
NOR Candidate (U035O44D001O22)

BBa_K1448007
BBa_K1448007 Version 1 (Component)
ERG20-2 generator

NOR1
BBa_I732351 Version 1 (Component)
NOR Candidate (U037O11D002O22)

NAND2616
BBa_I732301 Version 1 (Component)
NAND Candidate (U073O26D001O16)

BBa_K1906006
BBa_K1906006 Version 1 (Component)
Kanamycin

NAND2717
BBa_I732302 Version 1 (Component)
NAND Candidate (U073O27D001O17)

KanR
BBa_J31003 Version 1 (Component)
kanamycin resistance forward (KanF) [cf. BBa_J23012 & BBa_J31002]

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

NAND2-7
BBa_I732304 Version 1 (Component)
NAND Candidate (U073O22D001O47)

BBa_K1486024
BBa_K1486024 Version 1 (Component)
Yeast kanamycin resistance

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K1404008
BBa_K1404008 Version 1 (Component)
p70-CsgA-His*2, double His-tagged curli generator

BBa_K2027047
BBa_K2027047 Version 1 (Component)
ATP aptamer

BBa_K411105
BBa_K411105 Version 1 (Component)
eIF4A binding aptamer

KanR
BBa_P1007 Version 1 (Component)
kanamycin resistance cassette

BBa_K1618030
BBa_K1618030 Version 1 (Component)
Acyltransferase Candidate 2 -Fused to GFP -Expression Construct

BBa_K1368011
BBa_K1368011 Version 1 (Component)
Spinach Aptamer 13-2 RNA with Stabilizing tRNA Scaffold

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

NAND01
BBa_I732303 Version 1 (Component)
NAND Candidate (U073O22D001O46)

NAND59
BBa_I732305 Version 1 (Component)
NAND Candidate (U073O22D059O46)

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

NANDbeta
BBa_I732306 Version 1 (Component)
NAND Candidate (U073O11D002O22)

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

BBa_K1614018
BBa_K1614018 Version 1 (Component)
ATP Aptamer Spinach 2.1