SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

BBa_K1614017
BBa_K1614017 Version 1 (Component)
software generated kanamycin aptamer (candidate 3)

BBa_K2066019
BBa_K2066019 Version 1 (Component)
UNS 3 Sequence, from Torella et al., 2013

BBa_K1614013
BBa_K1614013 Version 1 (Component)
software generated kanamycin aptamer (candidate 2)

BBa_K1614009
BBa_K1614009 Version 1 (Component)
software generated kanamycin aptamer (candidate 1)

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

kanR
BBa_P1003 Version 1 (Component)
kanamycin resistance cassette

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_K1614021
BBa_K1614021 Version 1 (Component)
Software-generated p53 aptamer

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1614023
BBa_K1614023 Version 1 (Component)
Actin AptaBody with software generated actin aptamer (8mer)

BBa_K1614024
BBa_K1614024 Version 1 (Component)
Actin AptaBody with software generated actin aptamer (17mer)

BBa_K1424003
BBa_K1424003 Version 1 (Component)
Kanamycin resistance for Synechocystis

BBa_K1618035
BBa_K1618035 Version 1 (Component)
Acyltransferase Candidate 3 Expression Construct

HP3 3
BBa_B0101 Version 1 (Component)
HP3 3

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

BBa_K309012
BBa_K309012 Version 1 (Component)
Unc-54 3' UTR (for use in C. elegans chassis)

NOR2
BBa_I732352 Version 1 (Component)
NOR Candidate (U035O44D001O22)

NOR1
BBa_I732351 Version 1 (Component)
NOR Candidate (U037O11D002O22)

NAND2616
BBa_I732301 Version 1 (Component)
NAND Candidate (U073O26D001O16)

BBa_K1906006
BBa_K1906006 Version 1 (Component)
Kanamycin

NAND2717
BBa_I732302 Version 1 (Component)
NAND Candidate (U073O27D001O17)

KanR
BBa_J31003 Version 1 (Component)
kanamycin resistance forward (KanF) [cf. BBa_J23012 & BBa_J31002]

NAND2-7
BBa_I732304 Version 1 (Component)
NAND Candidate (U073O22D001O47)

BBa_K1486024
BBa_K1486024 Version 1 (Component)
Yeast kanamycin resistance

BBa_K2027047
BBa_K2027047 Version 1 (Component)
ATP aptamer

BBa_K411105
BBa_K411105 Version 1 (Component)
eIF4A binding aptamer

BBa_K165011
BBa_K165011 Version 1 (Component)
Zif268-HIV binding sites (3)

KanR
BBa_P1007 Version 1 (Component)
kanamycin resistance cassette

BBa_K1618031
BBa_K1618031 Version 1 (Component)
Acyltransferase Candidate 3 -Fused to GFP -Expression Construct

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

NAND01
BBa_I732303 Version 1 (Component)
NAND Candidate (U073O22D001O46)

NAND59
BBa_I732305 Version 1 (Component)
NAND Candidate (U073O22D059O46)

RFC105 NN
BBa_K1362415 Version 1 (Component)
N-terminal splicing overhang TGCT=Cys+1/3 Leu|Ile RFC[105] overhang NN

NANDbeta
BBa_I732306 Version 1 (Component)
NAND Candidate (U073O11D002O22)

BBa_K1614018
BBa_K1614018 Version 1 (Component)
ATP Aptamer Spinach 2.1

BBa_I1466
BBa_I1466 Version 1 (Component)
RhlR protein generator (LVA-)

BBa_K1323013
BBa_K1323013 Version 1 (Component)
aadD - Kanamycin Resistance Gene Coding Sequence

kanR
BBa_K389005 Version 1 (Component)
Kanamycin resistance

BBa_M36129
BBa_M36129 Version 1 (Component)
PP7 aptamer

BBa_K081012
BBa_K081012 Version 1 (Component)
GFP protein generator - PoPS->GFP

PcpcB-Kana
BBa_K1642003 Version 1 (Component)
Kanamycin Resistance Cassette in Cyanobacteria