SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
spaKSpaK Version (Component) spaRSpaR Version (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
PspaSPspaS_core Version (Component) BBa_K1351012BBa_K1351012 Version 1 (Component)spaS Subtilin (antimicrobial peptide, Freiburg standard)
BBa_K1351013BBa_K1351013 Version 1 (Component)spaS Subtilin (antimicrobial peptide)
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
linkerBBa_K157009 Version 1 (Component)Split fluorophore linker; Freiburg standard
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1377001BBa_K1377001 Version 1 (Component)spaA backward + sortase A + spaB + spaC
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_K823039BBa_K823039 Version 1 (Component)gfpmut1 (B. subtilis optimized + Freiburg standard)
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
Subtilin PBBa_K104001 Version 1 (Component)Sensor for small peptide Subtilin
LL-37BBa_K1230001 Version 1 (Component)LL-37 antimicrobial peptide
linkerBBa_K365005 Version 1 (Component)20 aa linker RFC-25 (fusion standard Freiburg)
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
Pveg-spoVGBBa_K143053 Version 1 (Component)Promoter Pveg and RBS spoVG for B. subtilis
beta-galacBBa_K823019 Version 1 (Component)LacZ (RBS+Freiburg standard)
BBa_K090505BBa_K090505 Version 1 (Component)''Bacillus subtilis'' consensus RBS
BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
BBa_J36835BBa_J36835 Version 1 (Component)Lipoprotein signal peptide
PvegBBa_K143012 Version 1 (Component)Promoter veg a constitutive promoter for B. subtilis
BBa_I20289BBa_I20289 Version 1 (Component)PhiRVI excisionase-Freiburg Standard
BBa_I20288BBa_I20288 Version 1 (Component)PhiRVI integrase- Freiburg standard
BBa_I20285BBa_I20285 Version 1 (Component)Bxb1 Excisionase-Freiburg standard
BBa_K549025BBa_K549025 Version 1 (Component)petE2 in Freiburg-standard
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K1351008BBa_K1351008 Version 1 (Component)Signal peptide of B. subtilis endonuclease YhcR
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
BBa_K823038BBa_K823038 Version 1 (Component)Strep-tag (Freiburg standard+RBS)
BBa_I20286BBa_I20286 Version 1 (Component)TP901-1 integrase- Freiburg standard