SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
GFP generaBBa_E0840 Version 1 (Component)GFP generator
//testtest Version 1 (Collection) //test1test1 Version 1 (Collection) BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
PESTBBa_J176018 Version 1 (Component)PEST
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_K249001BBa_K249001 Version 1 (Component)Arabinose Induced Inverter
BBa_I11002BBa_I11002 Version 1 (Component)test inverter construct
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_J69604BBa_J69604 Version 1 (Component)lacI Inverter Test Construct A
BBa_J69616BBa_J69616 Version 1 (Component)tetR Inverter Test Construct B
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_I13535BBa_I13535 Version 1 (Component)Test construct for screening plasmid
SpacerSpacer Version 1 (Component) CouplingCoupling Version 1 (Component)Translational coupler
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
BBa_I13023BBa_I13023 Version 1 (Component)QPI Test Construct Intermediate (Q01400.E0430)
ATGATG Version 1 (Component) pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
MCSMCS Version 1 (Component) eyfpBBa_E0031 Version 1 (Component)EYFP (RBS+ LVA-)
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_E0422BBa_E0422 Version 1 (Component)ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K611013BBa_K611013 Version 1 (Component)pLacI Characterization Construct
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K173005BBa_K173005 Version 1 (Component)tetR logic inverter
BBa_K137019BBa_K137019 Version 1 (Component)AHL receiver + tet inverter + GFP
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
Zif23BBa_R2000 Version 1 (Component)Promoter, Zif23 regulated, test: between
BBa_K608002BBa_K608002 Version 1 (Component)strong Promoter and strong RBS
BBa_I13021BBa_I13021 Version 1 (Component)QPI Test Construct Intermediate (Q04121.E0430)
BBa_K376025BBa_K376025 Version 1 (Component)LuxI+Tet Inverter+ Lambda Repressor
BBa_I13020BBa_I13020 Version 1 (Component)QPI Test Construct Intermediate (Q04530.E0430)